RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 GRHPRQ9UBQ7 328 aa12.15□□□□□ -0.46
CHRD-209ENST00000461120 POFUT2Q9Y2G5 429 aa12.15□□□□□ -0.46
CHRD-209ENST00000461120 KLF2Q9Y5W3 355 aaPredicted RBP12.15□□□□□ -0.46
CHRD-209ENST00000461120 TEX13CA0A0J9YWL9 993 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 CENPBD1B2RD01 187 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 H0YHG0 523 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 M0R3G1 203 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 BHLHE40O14503 412 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 IMPA2O14732 288 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 ARPC3O15145 178 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 MITFO75030 526 aaPredicted RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 KRT33AO76009 404 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 COX5AP20674 150 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 IGHV1-2P23083 117 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 SSTR2P30874 369 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 SDHAP31040 664 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 FOXG1P55316 489 aaPredicted RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 FAM27E3Q08E93 113 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 KRR1Q13601 381 aaKnown RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 DAG1Q14118 895 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 P2RY6Q15077 328 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 MESTQ5EB52 335 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 STAC2Q6ZMT1 411 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 LINGO2Q7L985 606 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 CXorf67Q86X51 503 aaPredicted RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 PARP8Q8N3A8 854 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 NOXO1Q8NFA2 376 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 TEX47Q8TBZ9 253 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 MAGEE2Q8TD90 523 aaPredicted RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 RASD2Q96D21 266 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 ALKBH3Q96Q83 286 aaPredicted RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 RBM4BQ9BQ04 359 aaKnown RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 C9orf16Q9BUW7 83 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 ALG12Q9BV10 488 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 RBM4Q9BWF3 364 aaKnown RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 KRT84Q9NSB2 600 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 GLTPQ9NZD2 209 aa12.14□□□□□ -0.47
CHRD-209ENST00000461120 TMEFF2Q9UIK5 374 aaPredicted RBP12.14□□□□□ -0.47
CHRD-209ENST00000461120 ZNF587BE7ETH6 402 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 H3BN98 237 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 RPL36A-HNRNPH2H7BZ11 118 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 SOCS2O14508 198 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 EI24O14681 340 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 ARHGEF9O43307 516 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 IDH3BO43837 385 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 ITGA5P08648 1049 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 PSMB1P20618 241 aaKnown RBP12.13□□□□□ -0.47
CHRD-209ENST00000461120 IGFBP5P24593 272 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 POU1F1P28069 291 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 MPGP29372 298 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 CLRN1P58418 232 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 ROR2Q01974 943 aaKnown RBP12.13□□□□□ -0.47
CHRD-209ENST00000461120 ITGADQ13349 1161 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 HIST3H3Q16695 136 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 SFRP5Q5T4F7 317 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 ABHD12BQ7Z5M8 362 aaPredicted RBP12.13□□□□□ -0.47
CHRD-209ENST00000461120 LNX2Q8N448 690 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 CBR4Q8N4T8 237 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 ZNF433Q8N7K0 673 aaPredicted RBP12.13□□□□□ -0.47
CHRD-209ENST00000461120 SYT14Q8NB59 555 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 OR2T33Q8NG76 320 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 OR4Q3Q8NH05 313 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 NMD3Q96D46 503 aaKnown RBP12.13□□□□□ -0.47
CHRD-209ENST00000461120 ULBP2Q9BZM5 246 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 GPR35Q9HC97 309 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 B3GAT2Q9NPZ5 323 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 TAS2R16Q9NYV7 291 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 USE1Q9NZ43 259 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 BAIAP2Q9UQB8 552 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 HCFC1P51610 2035 aa12.13□□□□□ -0.47
CHRD-209ENST00000461120 C16orf97H3BN30 126 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 H7C1C5 153 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 XKRYO14609 159 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 LYZL6O75951 148 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 ALPLP05186 524 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 NOS3P29474 1203 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 CCKARP32238 428 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 UGT2B10P36537 528 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 ALDH3A2P51648 485 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 CRISP1P54107 249 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 LCN6P62502 163 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 ESRRGP62508 458 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 SORDQ00796 357 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 CD47Q08722 323 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 GINS1Q14691 196 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 TRIP10Q15642 601 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 TSC22D1Q15714 1073 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 CEACAM16Q2WEN9 425 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 PGGHGQ32M88 737 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 C9orf135Q5VTT2 229 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 LRFN4Q6PJG9 635 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 ZBTB49Q6ZSB9 765 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 PTCHD4Q6ZW05 846 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 ADCK1Q86TW2 530 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 IQCF1Q8N6M8 205 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 KISS1RQ969F8 398 aaPredicted RBP12.12□□□□□ -0.47
CHRD-209ENST00000461120 MCHR2Q969V1 340 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 EME1Q96AY2 570 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms