RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ACTC1P68032 377 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ACTA1P68133 377 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 SFXN4Q6P4A7 337 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 SLC16A13Q7RTY0 426 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 PLXDC1Q8IUK5 500 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ZNF248Q8NDW4 579 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 C1orf216Q8TAB5 229 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 INTS12Q96CB8 462 aaKnown RBP14.03□□□□□ -0.16
LMNB1-203ENST00000460265 PDCD10Q9BUL8 212 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ALG12Q9BV10 488 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ARL6Q9H0F7 186 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 SYT4Q9H2B2 425 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 METTL12A8MUP2 240 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 D6RAR5 112 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ZNF749O43361 778 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 GP1BBP13224 206 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 PTBP1P26599 531 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ACAA2P42765 397 aaKnown RBP14.03□□□□□ -0.16
LMNB1-203ENST00000460265 HSD17B7P56937 341 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 SIRPAP78324 504 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 RIPPLY1Q0D2K3 151 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 DPY19L4Q7Z388 723 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 DAZLQ92904 295 aaKnown RBP14.03□□□□□ -0.16
LMNB1-203ENST00000460265 TMEM185BQ9H7F4 350 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 NIT2Q9NQR4 276 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 PURGQ9UJV8 347 aaKnown RBP14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ZNF337Q9Y3M9 751 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 EIF1AYO14602 144 aaKnown RBP14.03□□□□□ -0.16
LMNB1-203ENST00000460265 OIP5O43482 229 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 RENP00797 406 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 TAS2R43P59537 309 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 RAB11FIP2Q7L804 512 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ADAMTS14Q8WXS8 1223 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 GCDHQ92947 438 aaPredicted RBP14.03□□□□□ -0.16
LMNB1-203ENST00000460265 MOGAT1Q96PD6 335 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 UBE2ZQ9H832 354 aaPredicted RBP14.03□□□□□ -0.16
LMNB1-203ENST00000460265 CENPMQ9NSP4 180 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 TAS2R3Q9NYW6 316 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 NDRG3Q9UGV2 375 aa14.03□□□□□ -0.16
LMNB1-203ENST00000460265 ARPC5O15511 151 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 KHDRBS3O75525 346 aaKnown RBP14.02□□□□□ -0.16
LMNB1-203ENST00000460265 FGF2P09038 288 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 SPARCP09486 303 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 SULT1A3P0DMM9 295 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 SULT1A4P0DMN0 295 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 NFYAP23511 347 aaPredicted RBP14.02□□□□□ -0.16
LMNB1-203ENST00000460265 ARRB1P49407 418 aaPredicted RBP14.02□□□□□ -0.16
LMNB1-203ENST00000460265 PHF19Q5T6S3 580 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 SFRP4Q6FHJ7 346 aaPredicted RBP14.02□□□□□ -0.16
LMNB1-203ENST00000460265 SCARB1Q8WTV0 552 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 NKX3-1Q99801 234 aaPredicted RBP14.02□□□□□ -0.16
LMNB1-203ENST00000460265 ULBP3Q9BZM4 244 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 MGAT4CQ9UBM8 478 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 RNF215Q9Y6U7 377 aa14.02□□□□□ -0.16
LMNB1-203ENST00000460265 OR6C68A6NDL8 312 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 H3BML4 177 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 ICOSLGO75144 302 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 SERPINA3P01011 423 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 C14orf28Q4W4Y0 310 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 SLC25A30Q5SVS4 291 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 C1QL3Q5VWW1 255 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 WBP2NLQ6ICG8 309 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 ZFP82Q8N141 532 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 C12orf45Q8N5I9 185 aaPredicted RBP14.02□□□□□ -0.17
LMNB1-203ENST00000460265 ZPLD1Q8TCW7 415 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 TCEAL3Q969E4 200 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF285Q96NJ3 590 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 FSCN3Q9NQT6 498 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 MYEF2Q9P2K5 600 aaKnown RBP14.02□□□□□ -0.17
LMNB1-203ENST00000460265 POLR1DQ9Y2S0 133 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 A0A1B0GTH9 108 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 A0A1B0GW55 424 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 DUX4L2P0CJ85 424 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 DUX4L3P0CJ86 424 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 DUX4L4P0CJ87 422 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 DUX4L5P0CJ88 424 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 DUX4L6P0CJ89 424 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 DUX4L7P0CJ90 424 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 NME1P15531 152 aaKnown RBP14.02□□□□□ -0.17
LMNB1-203ENST00000460265 ADH7P40394 386 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 PITPNBP48739 271 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 HSD11B2P80365 405 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 MEIOBQ8N635 442 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 ADGRL4Q9HBW9 690 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 DUX4Q9UBX2 424 aa14.02□□□□□ -0.17
LMNB1-203ENST00000460265 ZNF223Q9UK11 482 aaPredicted RBP14.02□□□□□ -0.17
LMNB1-203ENST00000460265 SF3B6Q9Y3B4 125 aaKnown RBP14.02□□□□□ -0.17
LMNB1-203ENST00000460265 NUP210Q8TEM1 1887 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 KIAA1549LQ6ZVL6 1849 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 TTLL8A6PVC2 850 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 DISC1C4P0D8 188 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 TO15178 435 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 BCAT2O15382 392 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 FMO6PO60774 539 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 HPXP02790 462 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 ANXA2P07355 339 aaKnown RBP14.01□□□□□ -0.17
LMNB1-203ENST00000460265 FOLR1P15328 257 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 TOMM20Q15388 145 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 GSG1Q2KHT4 349 aa14.01□□□□□ -0.17
LMNB1-203ENST00000460265 PABPC1L2AQ5JQF8 200 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms