RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 GIPP09681 153 aaPredicted RBP17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 TPMTP51580 245 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 ZNF684Q5T5D7 378 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 PMEPA1Q969W9 287 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 CGGBP1Q9UFW8 167 aaPredicted RBP17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 FBXO4Q9UKT5 387 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 PCOLCE2Q9UKZ9 415 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 FARSAQ9Y285 508 aaKnown RBP17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 OR5K3A6NET4 321 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 FOXS1O43638 330 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 RP2O75695 350 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 RAB40ALP0C0E4 278 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 RNH1P13489 461 aaKnown RBP17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 TACR3P29371 465 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 S100A11P31949 105 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 PRPS1P60891 318 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 RAP2BP61225 183 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 ZNF141Q15928 474 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 ELFN2Q5R3F8 820 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 RAB40AQ8WXH6 277 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 MAP3K3Q99759 626 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 PTDSS2Q9BVG9 487 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 MMP25Q9NPA2 562 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 OPN4Q9UHM6 478 aa17.75■□□□□ 0.43
CNEP1R1-203ENST00000458059 CABIN1Q9Y6J0 2220 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 OR4C45A6NMZ5 311 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 SPARCP09486 303 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 WDR38Q5JTN6 314 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 C9orf50Q5SZB4 431 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 ARHGAP40Q5TG30 622 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 DEFB119Q8N690 84 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 G6PC3Q9BUM1 346 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 COMMD4Q9H0A8 199 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 ELOVL3Q9HB03 270 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 POLE3Q9NRF9 147 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 RNF215Q9Y6U7 377 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 DCDC2BA2VCK2 349 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 OR2M5A3KFT3 312 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 C5orf67F2Z3F1 127 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 NPIPB9F8W1W9 429 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 PRAMEF2O60811 474 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 WNT11O96014 354 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 CTSEP14091 401 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 SLC35D3Q5M8T2 416 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 CHRDL2Q6WN34 429 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 CFAP77Q6ZQR2 320 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 FAM122BQ7Z309 247 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 GPAT4Q86UL3 456 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 ADGRG3Q86Y34 549 aa17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 ZNF784Q8NCA9 323 aaPredicted RBP17.74■□□□□ 0.43
CNEP1R1-203ENST00000458059 TMEM272A0A1B0GTI8 110 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 CTAG2O75638 210 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 SDHAP31040 664 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 FOXL2P58012 376 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 PRAMEF17Q5VTA0 474 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 OLFML2AQ68BL7 652 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 LIN54Q6MZP7 749 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 TAAR8Q969N4 342 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 MNTQ99583 582 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 REG4Q9BYZ8 158 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 GGT3PA6NGU5 568 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 EFCAB7A8K855 629 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 F5H5P2 479 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 CCSO14618 274 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 KIR3DL2P43630 455 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 GPR3P46089 330 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 RPS4XP62701 263 aaKnown RBP17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 RBMS2Q15434 407 aaKnown RBP17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 NKPD1Q17RQ9 610 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 C2orf76Q3KRA6 126 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 SCGB2B2Q4G0G5 96 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 ELSPBP1Q96BH3 223 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 WBP1Q96G27 269 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 RADILQ96JH8 1075 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 NXF5Q9H1B4 397 aaKnown RBP17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 UNC13CQ8NB66 2214 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 TCRBV21S2A2A0A5A6 115 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 C17orf105B2RV13 164 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 HCRTR2O43614 444 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 ABHD16AO95870 558 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 HOXD4P09016 255 aaPredicted RBP17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 CALCBP10092 127 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 ACHEP22303 614 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 OR2AK2Q8NG84 335 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 ST8SIA4Q92187 359 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 KLHL15Q96M94 604 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 RWDD3Q9Y3V2 267 aa17.73■□□□□ 0.43
CNEP1R1-203ENST00000458059 ZNF749O43361 778 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 DLX5P56178 289 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 SPICQ8N5J4 248 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 GPR148Q8TDV2 347 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 OBP2AQ9NY56 170 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 STEAP1Q9UHE8 339 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 PCDH15Q96QU1 1955 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 H7C417 338 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 PNPP00491 289 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 RLN2P04090 185 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 HIST1H2ABP04908 130 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 NKAIN2Q5VXU1 208 aa17.72■□□□□ 0.43
CNEP1R1-203ENST00000458059 HIST3H2AQ7L7L0 130 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms