RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SLC17A5Q9NRA2 495 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 GRHPRQ9UBQ7 328 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 REV1Q9UBZ9 1251 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 SLC25A15Q9Y619 301 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 CENPEQ02224 2701 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 IGKV1D-43A0A0B4J1Z2 117 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 ANKRD65E5RJM6 399 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 BHLHE40O14503 412 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 IMPA2O14732 288 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 SIAH2O43255 324 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 ARHGEF9O43307 516 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 DHHO43323 396 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 PPP1R3DO95685 299 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 IGFBP1P08833 259 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-215ENST00000457039 QDPRP09417 244 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 CDH2P19022 906 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-215ENST00000457039 RPS6KA3P51812 740 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 ARHGDIAP52565 204 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 KRR1Q13601 381 aaKnown RBP12.38□□□□□ -0.43
SMPD4-215ENST00000457039 TBRG1Q3YBR2 411 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 HIKESHIQ53FT3 197 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 C1QTNF12Q5T7M4 302 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 FAHD1Q6P587 224 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 ANKRD16Q6P6B7 361 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 SLC25A47Q6Q0C1 308 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 HIPK1Q86Z02 1210 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 SYT14Q8NB59 555 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 RASD2Q96D21 266 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 CENPNQ96H22 339 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-215ENST00000457039 ZC3HAV1LQ96H79 300 aaKnown RBP12.38□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF570Q96NI8 536 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 PKP2Q99959 881 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 GABARAPL1Q9H0R8 117 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 SMURF2Q9HAU4 748 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 S100A14Q9HCY8 104 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF226Q9NYT6 803 aa12.38□□□□□ -0.43
SMPD4-215ENST00000457039 PRSS37A4D1T9 235 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 A6NNC1 897 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 DEFB108AA8MXU0 73 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 AHCYL1O43865 530 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 GOSR1O95249 250 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 PRF1P14222 555 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 LOXP28300 417 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-215ENST00000457039 DAPP51397 102 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 MYBPC1Q00872 1141 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 FMODQ06828 376 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 PPA1Q15181 289 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 CLEC12AQ5QGZ9 265 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 THEM4Q5T1C6 240 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 PTCHD4Q6ZW05 846 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 SSX8Q7RTT4 187 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 ADCK1Q86TW2 530 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 SVOPLQ8N434 492 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 FNDC8Q8TC99 324 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 ERMAPQ96PL5 475 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-215ENST00000457039 FOXB1Q99853 325 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 IFT27Q9BW83 186 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 SEMA6AQ9H2E6 1030 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 VSX1Q9NZR4 365 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-215ENST00000457039 AMDHD2Q9Y303 409 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 PRR14LQ5THK1 2151 aa12.37□□□□□ -0.43
SMPD4-215ENST00000457039 A0A096LPE4 126 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 ARPC4-TTLL3A0A0A6YYG9 625 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 A0A1W2PPZ6 126 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 A0A1W2PR80 420 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 SLC22A23A1A5C7 686 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 ERICH4A6NGS2 130 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 G3V2T6 193 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 H7C1C5 153 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 SOCS2O14508 198 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 XKRYO14609 159 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 CASKO14936 926 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 IDH3BO43837 385 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 SEC14L2O76054 403 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 SOX14O95416 240 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 SLC2A10O95528 541 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 HRGP04196 525 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 NR2C1P13056 603 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF23P17027 643 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 CDKN2AP42771 156 aaKnown RBP12.36□□□□□ -0.43
SMPD4-215ENST00000457039 LCN6P62502 163 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 CD47Q08722 323 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 SLC36A3Q495N2 470 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF362Q5T0B9 420 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-215ENST00000457039 FOXL2NBQ6ZUU3 175 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 WFDC8Q8IUA0 241 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 ZDHHC13Q8IUH4 622 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 LNX2Q8N448 690 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 ATG16L2Q8NAA4 619 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 OR52L1Q8NGH7 329 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 OR4Q3Q8NH05 313 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 OR52N5Q8NH56 324 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 DNAJC9Q8WXX5 260 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 RBP7Q96R05 134 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 SNX18Q96RF0 628 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 TSSK6Q9BXA6 273 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 OBP2BQ9NPH6 170 aa12.36□□□□□ -0.43
SMPD4-215ENST00000457039 TBC1D23Q9NUY8 699 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms