RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 C12orf40Q86WS4 652 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 OR6S1Q8NH40 331 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 TMED6Q8WW62 240 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 SEH1LQ96EE3 360 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ADAD1Q96M93 576 aaKnown RBP9.37□□□□□ -0.91
CLIP4-208ENST00000456385 LMF1Q96S06 567 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 SELENOIQ9C0D9 397 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ATG5Q9H1Y0 275 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ACKR4Q9NPB9 350 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 UQCC1Q9NVA1 299 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 MBD2Q9UBB5 411 aa9.37□□□□□ -0.91
CLIP4-208ENST00000456385 ALPK2Q86TB3 2170 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 COLCA2A8K830 154 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 FGF16O43320 207 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 EIF1BO60739 113 aaKnown RBP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 C8AP07357 584 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 PGAM2P15259 253 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF28P17035 718 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 GABRA3P34903 492 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 AQP2P41181 271 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 EIF1P41567 113 aaKnown RBP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ACAA2P42765 397 aaKnown RBP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 CDKN2AP42771 156 aaKnown RBP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 IRF4Q15306 451 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 DEFB134Q4QY38 66 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 VWA2Q5GFL6 755 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 LEG1Q6P5S2 330 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 SLC39A5Q6ZMH5 540 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ETV3LQ6ZN32 361 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ERN2Q76MJ5 926 aaKnown RBP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 SLC39A11Q8N1S5 342 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 RAB42Q8N4Z0 105 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 OR52E1Q8NGJ3 308 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 OR10R2Q8NGX6 335 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ZCCHC10Q8TBK6 192 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 GPX8Q8TED1 209 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ZBTB8AQ96BR9 441 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 CNTNAP3BQ96NU0 1288 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 NMNAT2Q9BZQ4 307 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 TVP23AA6NH52 213 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF860A6NHJ4 632 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 LRRC72A6NJI9 287 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 DCTN6O00399 190 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 TMEM127O75204 238 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 GLCEO94923 617 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 PRNPP04156 253 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ABOP16442 354 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 DDX6P26196 483 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 TCEA2Q15560 299 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 GFOD2Q3B7J2 385 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 AKIRIN2Q53H80 203 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 PRAMEF17Q5VTA0 474 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 PGAP1Q75T13 922 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF627Q7L945 461 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 FAM220AQ7Z4H9 259 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 VN1R4Q7Z5H5 301 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 SFTPA1Q8IWL2 248 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF676Q8N7Q3 588 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 ZSCAN1Q8NBB4 408 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 INO80EQ8NBZ0 244 aaPredicted RBP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 OR4S1Q8NGB4 309 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 OR13C8Q8NGS7 320 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 PHOSPHO1Q8TCT1 267 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 NXPE3Q969Y0 559 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 FAM3DQ96BQ1 224 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 PIK3IP1Q96FE7 263 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 MRPL48Q96GC5 212 aaKnown RBP9.36□□□□□ -0.91
CLIP4-208ENST00000456385 SLC6A7Q99884 636 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 POTEKPQ9BYX7 375 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 UPB1Q9UBR1 384 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 IKZF2Q9UKS7 526 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 VSIG4Q9Y279 399 aa9.36□□□□□ -0.91
CLIP4-208ENST00000456385 EML5Q05BV3 1969 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 SCN5AQ14524 2016 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 A0A0B4J2A0 478 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 OR4C45A6NMZ5 311 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 EEF1E1-BLOC1S5C9J1V9 151 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 SSX5O60225 188 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 BRINP1O60477 761 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 GPANK1O95872 356 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 DCNP07585 359 aaKnown RBP9.35□□□□□ -0.91
CLIP4-208ENST00000456385 TACSTD2P09758 323 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 ZNF735P0CB33 412 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 CD79AP11912 226 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 CPMP14384 443 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 AKR1C3P42330 323 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 PRKXP51817 358 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 TAS2R19P59542 299 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 ECH1Q13011 328 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 RUNX2Q13950 521 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 FAM53BQ14153 422 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 TCEAL5Q5H9L2 206 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 FHL5Q5TD97 284 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 KIRREL2Q6UWL6 708 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 CD163Q86VB7 1156 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 PRSS35Q8N3Z0 413 aa9.35□□□□□ -0.91
CLIP4-208ENST00000456385 SLC22A8Q8TCC7 542 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms