RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 GLO1Q04760 184 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 C19orf57Q0VDD7 668 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 MYBPHQ13203 477 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 TIGD4Q8IY51 512 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 OR10H5Q8NGA6 315 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 OR11G2Q8NGC1 345 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 SLC26A1Q9H2B4 701 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 A0A0G2JMP0 313 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 A0A0X1KG70 313 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 OGG1O15527 345 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 IGF2P01344 180 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 MAS1P04201 325 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 SSR4P51571 173 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 INSM1Q01101 510 aaPredicted RBP12.29□□□□□ -0.44
CLK3-203ENST00000454830 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 MFSD13AQ14CX5 517 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 PEAR1Q5VY43 1037 aaPredicted RBP12.29□□□□□ -0.44
CLK3-203ENST00000454830 SLC18B1Q6NT16 456 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 MTFR2Q6P444 385 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 DRAXINQ8NBI3 349 aaPredicted RBP12.29□□□□□ -0.44
CLK3-203ENST00000454830 OR4M2Q8NGB6 313 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 ACOT12Q8WYK0 555 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 TTYH2Q9BSA4 534 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 CHST11Q9NPF2 352 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 IGHV1-45A0A0A0MS14 117 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 SLC19A2O60779 497 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 TXNDC12O95881 172 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 CFL1P23528 166 aaKnown RBP12.29□□□□□ -0.44
CLK3-203ENST00000454830 EVX1P49640 407 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 HSF1Q00613 529 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 ALKBH1Q13686 389 aaKnown RBP12.29□□□□□ -0.44
CLK3-203ENST00000454830 EXT1Q16394 746 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 CEP78Q5JTW2 689 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 NUP210LQ5VU65 1888 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 ESPNLQ6ZVH7 1005 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 IZUMO1Q8IYV9 350 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 OR4M1Q8NGD0 313 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 UBASH3BQ8TF42 649 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 DKKL1Q9UK85 242 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 TBC1D24Q9ULP9 559 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 FKBP7Q9Y680 259 aa12.29□□□□□ -0.44
CLK3-203ENST00000454830 A0A1W2PPL8 197 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 B4DXG7 233 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 NPIPB7O75200 414 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 KLF7O75840 302 aaPredicted RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 DXOO77932 396 aaKnown RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 EIF4EP06730 217 aaKnown RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 FBXO45P0C2W1 286 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 CD53P19397 219 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 MSX1P28360 303 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 AGAP7PQ5VUJ5 663 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 C5orf46Q6UWT4 87 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 TPRA1Q86W33 373 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 NEURL2Q9BR09 285 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 MRPL39Q9NYK5 338 aaKnown RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 SLC22A23A1A5C7 686 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 PSKH1P11801 424 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 CRABP1P29762 137 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 DAP3P51398 398 aaKnown RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 SUMO3P55854 103 aaPredicted RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 LRFN4Q6PJG9 635 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 CORO6Q6QEF8 472 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 MDGA2Q7Z553 956 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 OR5H6Q8NGV6 325 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 RBP7Q96R05 134 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 FAM240BA0A1B0GVZ2 78 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 SULT2B1O00204 365 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 GPRIN2O60269 458 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 CCL3P10147 92 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 COX6A1P12074 109 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 SRMP19623 302 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 ALOX5APP20292 161 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 DPP4P27487 766 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 CCDC58Q4VC31 144 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 B3GNTL1Q67FW5 361 aaPredicted RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 C6orf15Q6UXA7 325 aaPredicted RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 RAB43Q86YS6 212 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 UEVLDQ8IX04 471 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 MFSD8Q8NHS3 518 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 MRGPRX4Q96LA9 322 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 DERL3Q96Q80 235 aa12.28□□□□□ -0.44
CLK3-203ENST00000454830 C11orf54Q9H0W9 315 aaPredicted RBP12.28□□□□□ -0.44
CLK3-203ENST00000454830 EEF1E1O43324 174 aaKnown RBP12.27□□□□□ -0.44
CLK3-203ENST00000454830 GALP22466 123 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 RAB25P57735 213 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 RPS15P62841 145 aaKnown RBP12.27□□□□□ -0.44
CLK3-203ENST00000454830 NTRK2Q16620 822 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 PLPPR5Q32ZL2 321 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 C3orf33Q6P1S2 294 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 DNM1P34Q6PK57 102 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 ZNF517Q6ZMY9 492 aaPredicted RBP12.27□□□□□ -0.44
CLK3-203ENST00000454830 CDC20BQ86Y33 519 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 ELP5Q8TE02 316 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 TRAPPC4Q9Y296 219 aa12.27□□□□□ -0.44
CLK3-203ENST00000454830 MAP1BP46821 2468 aaKnown RBP12.27□□□□□ -0.44
CLK3-203ENST00000454830 PTPRZ1P23471 2315 aaPredicted RBP12.27□□□□□ -0.44
CLK3-203ENST00000454830 ANXA2P2A6NMY6 339 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 NOTOA8MTQ0 251 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms