RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-219	ENST00000453310	MYBPC1	Q00872	1141 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	GABRA6	Q16445	453 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	SLC36A3	Q495N2	470 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	OR7E24	Q6IFN5	339 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	LRFN4	Q6PJG9	635 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	OR1K1	Q8NGR3	316 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	TEX47	Q8TBZ9	253 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	MCHR2	Q969V1	340 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	NMD3	Q96D46	503 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	WFIKKN1	Q96NZ8	548 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	USB1	Q9BQ65	265 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	MED18	Q9BUE0	208 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	TSSK6	Q9BXA6	273 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	SMURF2	Q9HAU4	748 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	CRIM1	Q9NZV1	1036 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	POFUT2	Q9Y2G5	429 aa		13.77	□□□□□ -0.21
RBM39-219	ENST00000453310	PRSS37	A4D1T9	235 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	ZNF99	A8MXY4	864 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM39-219	ENST00000453310		H7C1C5	153 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	IDH3B	O43837	385 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	NOS3	P29474	1203 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	ZNF133	P52736	654 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	LCN6	P62502	163 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	FMOD	Q06828	376 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	RCN1	Q15293	331 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	STK11	Q15831	433 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	HIST2H2BC	Q6DN03	193 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	ADCK1	Q86TW2	530 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	OR2T33	Q8NG76	320 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	OR4Q3	Q8NH05	313 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	FNDC8	Q8TC99	324 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	DACH2	Q96NX9	599 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	MUS81	Q96NY9	551 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	SLC24A3	Q9HC58	644 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	KRT84	Q9NSB2	600 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	BAIAP2	Q9UQB8	552 aa		13.76	□□□□□ -0.21
RBM39-219	ENST00000453310	SLC22A23	A1A5C7	686 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	OR5H1	A6NKK0	313 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	DHH	O43323	396 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	AHCYL1	O43865	530 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	SEC14L2	O76054	403 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	SLC2A10	O95528	541 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	HIST1H1C	P16403	213 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	POU1F1	P28069	291 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	ELF3	P78545	371 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	ARF1	P84077	181 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	PPP2R2B	Q00005	443 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	TIMM23B	Q5SRD1	257 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	THEM4	Q5T1C6	240 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	C10orf128	Q5T292	105 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	KDM4D	Q6B0I6	523 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	ANKRD16	Q6P6B7	361 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	C22orf34	Q6ZV56	151 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	PTCHD4	Q6ZW05	846 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	P2RY8	Q86VZ1	359 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	JAZF1	Q86VZ6	243 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	PARP8	Q8N3A8	854 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	LNX2	Q8N448	690 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	C17orf78	Q8N4C9	275 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	FAM222B	Q8WU58	562 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	BOD1	Q96IK1	185 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	RBP7	Q96R05	134 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	CIB1	Q99828	191 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	FOXB1	Q99853	325 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	RBM4B	Q9BQ04	359 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	RBM4	Q9BWF3	364 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	NELFA	Q9H3P2	528 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310	PKDREJ	Q9NTG1	2253 aa		13.75	□□□□□ -0.21
RBM39-219	ENST00000453310		A0A096LPE4	126 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	IGKV1D-43	A0A0B4J1Z2	117 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310		A0A1W2PPZ6	126 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	MITF	O75030	526 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	THBD	P07204	575 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	EPX	P11678	715 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	ANPEP	P15144	967 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	IGFBP5	P24593	272 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	HOXC12	P31275	282 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	CDKN2A	P42771	156 aa	Known RBP	13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	ZNF84	P51523	738 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	TAB1	Q15750	504 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	PGGHG	Q32M88	737 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	TBRG1	Q3YBR2	411 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	HIKESHI	Q53FT3	197 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	SLC35F1	Q5T1Q4	408 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	SLC27A4	Q6P1M0	643 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	LEG1	Q6P5S2	330 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	SLC25A47	Q6Q0C1	308 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	IQCF1	Q8N6M8	205 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	SDR9C7	Q8NEX9	313 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	OR4K13	Q8NH42	304 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	HSD17B8	Q92506	261 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	NSMAF	Q92636	917 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	BCL2L2	Q92843	193 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	OSBPL10	Q9BXB5	764 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	SYT4	Q9H2B2	425 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	SLC17A5	Q9NRA2	495 aa		13.74	□□□□□ -0.21
RBM39-219	ENST00000453310	VSX1	Q9NZR4	365 aa	Predicted RBP	13.74	□□□□□ -0.21

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