RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 ALKBH3Q96Q83 286 aaPredicted RBP7.79□□□□□ -1.16
COL8A1-203ENST00000452013 FUZQ9BT04 418 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 BDH2Q9BUT1 245 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 CHID1Q9BWS9 393 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 REEP1Q9H902 201 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 GRHPRQ9UBQ7 328 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 ZNF346Q9UL40 294 aaKnown RBP7.79□□□□□ -1.16
COL8A1-203ENST00000452013 MGAT4BQ9UQ53 548 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 USP9YO00507 2555 aaPredicted RBP7.79□□□□□ -1.16
COL8A1-203ENST00000452013 PHF3Q92576 2039 aaKnown RBP7.79□□□□□ -1.16
COL8A1-203ENST00000452013 HIVEP3Q5T1R4 2406 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 LRRK2Q5S007 2527 aa7.79□□□□□ -1.16
COL8A1-203ENST00000452013 DNAJC13O75165 2243 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 TRAV27A0A087WT01 109 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ARPC4-TTLL3A0A0A6YYG9 625 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 TRIM64A6NGJ6 449 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ZNF99A8MXY4 864 aaPredicted RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 CDC42EP2O14613 210 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 DHHO43323 396 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 TRMUO75648 421 aaKnown RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 CCNB2O95067 398 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 NDUFB2O95178 105 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 CST1P01037 141 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 CD14P08571 375 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 QDPRP09417 244 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 PGA4P0DJD7 388 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 PGA3P0DJD8 388 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ACVR1BP36896 505 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 GUCA1AP43080 201 aaPredicted RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ALDH3B2P48448 385 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ZNF84P51523 738 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 RPS6KA3P51812 740 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 RPL27P61353 136 aaKnown RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 MYBPC1Q00872 1141 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 MELKQ14680 651 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 SEC23BQ15437 767 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ATP6AP1Q15904 470 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 TBRG1Q3YBR2 411 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 HIKESHIQ53FT3 197 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 PHYHD1Q5SRE7 291 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 THEM4Q5T1C6 240 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ARMC4Q5T2S8 1044 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 GPR139Q6DWJ6 353 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 C1orf94Q6P1W5 598 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 DPY19L2P2Q6ZN68 376 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 LINGO2Q7L985 606 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 MEX3DQ86XN8 651 aaKnown RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 CROCCP3Q8IVE0 287 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ADGRG5Q8IZF4 528 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ARIH2OSQ8N7S6 290 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 LRRC75AQ8NAA5 344 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 OR13C2Q8NGS9 318 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ZNF420Q8TAQ5 688 aaPredicted RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 CANT1Q8WVQ1 401 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 LRTOMTQ8WZ04 291 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 TFAP2CQ92754 450 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 PPP1R14BQ96C90 147 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 CNBD2Q96M20 576 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 ALG12Q9BV10 488 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 C1QTNF6Q9BXI9 259 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 MRPL13Q9BYD1 178 aaKnown RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 RBM38Q9H0Z9 239 aaKnown RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 PLEKHF2Q9H8W4 249 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 UBAP1Q9NZ09 502 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 SIGLEC7Q9Y286 467 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 SAMHD1Q9Y3Z3 626 aaKnown RBP7.78□□□□□ -1.16
COL8A1-203ENST00000452013 RNF115Q9Y4L5 304 aa7.78□□□□□ -1.16
COL8A1-203ENST00000452013 KIAA1549Q9HCM3 1950 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 A0A096LPE4 126 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 A0A1W2PPZ6 126 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 A0A1W2PR80 420 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 DPRXA6NFQ7 191 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 M0R1B8 84 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 XKRYO14609 159 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 SIAH2O43255 324 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 ARHGEF9O43307 516 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 DEAF1O75398 565 aaPredicted RBP7.77□□□□□ -1.17
COL8A1-203ENST00000452013 FARS2O95363 451 aaKnown RBP7.77□□□□□ -1.17
COL8A1-203ENST00000452013 IGHMP01871 453 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 CBR1P16152 277 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 DNASE1P24855 282 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 FPR3P25089 353 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 LOXP28300 417 aaPredicted RBP7.77□□□□□ -1.17
COL8A1-203ENST00000452013 SLC6A6P31641 620 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 ARR3P36575 388 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 CAPZA2P47755 286 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 LIMS1P48059 325 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 ZNF83P51522 516 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 ARHGDIAP52565 204 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 ERVK-25P63136 954 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 TSPAN31Q12999 210 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 TOP3AQ13472 1001 aaPredicted RBP7.77□□□□□ -1.17
COL8A1-203ENST00000452013 KEAP1Q14145 624 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 HIST3H3Q16695 136 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 MICAQ29983 383 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 RFX4Q33E94 735 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 C3orf36Q3SXR2 165 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 ADAM5Q6NVV9 412 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 LRFN4Q6PJG9 635 aa7.77□□□□□ -1.17
COL8A1-203ENST00000452013 SMARCD3Q6STE5 483 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms