RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NPTNQ9Y639 398 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RGPD2P0DJD1 1756 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CCDC187A0A096LP49 1063 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TRBV9A0A0B4J1U6 114 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 C7orf77A4D0Y5 90 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 KDM4EB2RXH2 506 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 AGPAT2O15120 278 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 EMC8O43402 210 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 LEFTY1O75610 366 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TK1P04183 234 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SEMG1P04279 462 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 GAPDHP04406 335 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 ARAFP10398 606 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 HLA-DOBP13765 273 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ST6GAL1P15907 406 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RCC1P18754 421 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 OMGP23515 440 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PRPH2P23942 346 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 EDNRBP24530 442 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC19A1P41440 591 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 POLR2HP52434 150 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 SNRPD1P62314 119 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 HLA-DRB3P79483 266 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SMAD2Q15796 467 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 AMHR2Q16671 573 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MPEG1Q2M385 716 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 Q499Y3 187 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RAB6CQ53S08 254 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ALG10BQ5I7T1 473 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ACER2Q5QJU3 275 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PHF19Q5T6S3 580 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 KCTD11Q693B1 232 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR5M10Q6IEU7 315 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC18B1Q6NT16 456 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 C15orf39Q6ZRI6 1047 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TMPPEQ6ZT21 453 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TTLL10Q6ZVT0 673 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MOB3CQ70IA8 216 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RNF44Q7L0R7 432 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CAMKMTQ7Z624 323 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF808Q8N4W9 903 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 DTWD2Q8NBA8 298 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 HIST1H2BAQ96A08 127 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TMEM106AQ96A25 262 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PINX1Q96BK5 328 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 POM121Q96HA1 1249 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 STACQ99469 402 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TBX5Q99593 518 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TRMT61BQ9BVS5 477 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 RAB6CQ9H0N0 254 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 FZD3Q9NPG1 666 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF226Q9NYT6 803 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OPN4Q9UHM6 478 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TNFSF18Q9UNG2 199 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 STARD10Q9Y365 291 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 FLVCR1Q9Y5Y0 555 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MYH14Q7Z406 1995 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 COL5A2P05997 1499 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 TRAV9-1A0A075B6T8 112 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TRBV11-1A0A0K0K1C0 115 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DUXBA0A1W2PPF3 345 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3BA6NDS4 549 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 NEMP2A6NFY4 417 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 FZD9O00144 591 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SEPT4O43236 478 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF354AO60765 605 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 CLDN11O75508 207 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 IL33O95760 270 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DBIP07108 87 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 C8AP07357 584 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR8G3PP0DMU2 310 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ADH5P11766 374 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SERPINA2P20848 420 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 EPHA2P29317 976 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PYCR1P32322 319 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CTHP32929 405 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 XCR1P46094 333 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 GALR1P47211 349 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 GABRA4P48169 554 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ASCL1P50553 236 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF133P52736 654 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 TCL1AP56279 114 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 HSD11B2P80365 405 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ENPP2Q13822 863 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ELOCQ15369 112 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 GPR162Q16538 588 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CARD16Q5EG05 197 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 NCMAPQ5T1S8 102 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TBC1D3GQ6DHY5 549 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PAQR3Q6TCH7 311 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SBSNQ6UWP8 590 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 METTL7BQ6UX53 244 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TMEM184AQ6ZMB5 413 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MEX3BQ6ZN04 569 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 PLPPR4Q7Z2D5 763 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ISCA2Q86U28 154 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PTOV1Q86YD1 416 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 UEVLDQ8IX04 471 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF101Q8IZC7 436 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms