RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PIGFQ07326 219 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 CEACAM7Q14002 265 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 RASA2Q15283 850 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 OR7A5Q15622 319 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 ARHGAP11BQ3KRB8 267 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 CAVIN1Q6NZI2 390 aaKnown RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 C1orf122Q6ZSJ8 110 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 SNX32Q86XE0 403 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 KLBQ86Z14 1044 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 LRRC8AQ8IWT6 810 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 SDR9C7Q8NEX9 313 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 VANGL1Q8TAA9 524 aaPredicted RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 FAM76AQ8TAV0 307 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 GEMIN6Q8WXD5 167 aaKnown RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 DDB2Q92466 427 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 PHF21BQ96EK2 531 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 FAM120BQ96EK7 910 aaKnown RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 CDADC1Q9BWV3 514 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 TAPBPLQ9BX59 468 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 SLC19A3Q9BZV2 496 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 CDH20Q9HBT6 801 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 EXOSC3Q9NQT5 275 aaKnown RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 ZNRD1Q9P1U0 126 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 MIOXQ9UGB7 285 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 FAF1Q9UNN5 650 aaPredicted RBP6.5□□□□□ -1.37
LINC01961-201ENST00000449954 FAM96BQ9Y3D0 163 aa6.5□□□□□ -1.37
LINC01961-201ENST00000449954 TMEM72A0PK05 275 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ZSCAN5BA6NJL1 495 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 PHYHO14832 338 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ENTPD5O75356 428 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 TOX4O94842 621 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 OR4F21O95013 312 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 KLHL2O95198 593 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 AK1P00568 194 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 LIPFP07098 398 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 THRBP10828 461 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 MMP9P14780 707 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF43P17038 809 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 TNFRSF1AP19438 455 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 RYKP34925 604 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 PGM1P36871 562 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 UCP2P55851 309 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 CLDN17P56750 224 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 LINC00310P59036 64 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ERVS71-1P61550 626 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 RAB39AQ14964 217 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 FAM153CQ494X1 144 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 GRTP1Q5TC63 336 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ADAMTSL5Q6ZMM2 481 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF813Q6ZN06 617 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF584Q8IVC4 421 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ICA1LQ8NDH6 482 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 SLC30A7Q8NEW0 376 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 OR8B3Q8NGG8 313 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF483Q8TF39 744 aaPredicted RBP6.49□□□□□ -1.37
LINC01961-201ENST00000449954 CIDECQ96AQ7 238 aaPredicted RBP6.49□□□□□ -1.37
LINC01961-201ENST00000449954 NEIL1Q96FI4 390 aaPredicted RBP6.49□□□□□ -1.37
LINC01961-201ENST00000449954 OR8B2Q96RD0 313 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 PPA2Q9H2U2 334 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 TCF7L2Q9NQB0 619 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ADPRHL2Q9NX46 363 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 DCAF16Q9NXF7 216 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF224Q9NZL3 707 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 CLN8Q9UBY8 286 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 OSGIN1Q9UJX0 560 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF225Q9UK10 706 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 SIGLEC9Q9Y336 463 aa6.49□□□□□ -1.37
LINC01961-201ENST00000449954 ZC3H12DA2A288 527 aaKnown RBP6.48□□□□□ -1.37
LINC01961-201ENST00000449954 ZNF879B4DU55 563 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 IFNL4K9M1U5 179 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 TBX19O60806 448 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 SCN2BO60939 215 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 SMIM24O75264 130 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 STX11O75558 287 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 UGT2B17O75795 530 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 PTHP01270 115 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 VSIG10L2P0DP72 767 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 PF4V1P10720 104 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 FAHP16930 419 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 TNFSF4P23510 183 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 HMOX2P30519 316 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 HOXD3P31249 432 aaPredicted RBP6.48□□□□□ -1.37
LINC01961-201ENST00000449954 IDH2P48735 452 aaKnown RBP6.48□□□□□ -1.37
LINC01961-201ENST00000449954 PITPNBP48739 271 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 CDH13P55290 713 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 SRSF3P84103 164 aaKnown RBP6.48□□□□□ -1.37
LINC01961-201ENST00000449954 TNFAIP6P98066 277 aaPredicted RBP6.48□□□□□ -1.37
LINC01961-201ENST00000449954 PDIA2Q13087 525 aaKnown RBP6.48□□□□□ -1.37
LINC01961-201ENST00000449954 FASTKD3Q14CZ7 662 aaKnown RBP6.48□□□□□ -1.37
LINC01961-201ENST00000449954 PLECQ15149 4684 aaKnown RBP6.48□□□□□ -1.37
LINC01961-201ENST00000449954 GPR68Q15743 365 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 TBC1D28Q2M2D7 210 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 SPDYAQ5MJ70 313 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 AP1ARQ63HQ0 302 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 SLC27A4Q6P1M0 643 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 ARFGAP2Q8N6H7 521 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 OR56A1Q8NGH5 318 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 OR1J2Q8NGS2 313 aa6.48□□□□□ -1.37
LINC01961-201ENST00000449954 PPCDCQ96CD2 204 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms