RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 GLCEO94923 617 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 EDN3P14138 238 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 NTF4P34130 210 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 POU4F2Q12837 409 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 CAMK2DQ13557 499 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 GUSBP1Q15486 140 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 ST3GAL2Q16842 350 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 DNM1P34Q6PK57 102 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 B3GNT6Q6ZMB0 384 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 OR5M9Q8NGP3 310 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 OTULINQ96BN8 352 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 RHNO1Q9BSD3 238 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 OR51V1Q9H2C8 321 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 PARPBPQ9NWS1 579 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 B9D1Q9UPM9 204 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 EXOGQ9Y2C4 368 aaKnown RBP17.09■□□□□ 0.33
RPS28-202ENST00000449223 ARHGAP21Q5T5U3 1957 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 DOCK7Q96N67 2140 aa17.09■□□□□ 0.33
RPS28-202ENST00000449223 MBD3L4A6NDZ8 208 aaPredicted RBP17.08■□□□□ 0.32
RPS28-202ENST00000449223 MBD3L3A6NE82 208 aaPredicted RBP17.08■□□□□ 0.32
RPS28-202ENST00000449223 MBD3L5A6NJ08 208 aaPredicted RBP17.08■□□□□ 0.32
RPS28-202ENST00000449223 J3QRE1 110 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 ZNHIT1O43257 154 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 SS18L1O75177 396 aaPredicted RBP17.08■□□□□ 0.32
RPS28-202ENST00000449223 GYPBP06028 91 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 HTR1AP08908 422 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 CTLA4P16410 223 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 GSTT1P30711 240 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 SELENOPP49908 381 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 BLVRAP53004 296 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 CLRN1P58418 232 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 KLHL12Q53G59 568 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 KLHL22Q53GT1 634 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 RIPPLY2Q5TAB7 128 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 LCN1P1Q5VSP4 162 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 PLXDC2Q6UX71 529 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 C20orf196Q8IYI0 205 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 SYT14Q8NB59 555 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 MBD3L2Q8NHZ7 208 aaPredicted RBP17.08■□□□□ 0.32
RPS28-202ENST00000449223 ZNRF4Q8WWF5 429 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 RNFT2Q96EX2 444 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 TSSK2Q96PF2 358 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 RBP7Q96R05 134 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 TRIB1Q96RU8 372 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 COPS4Q9BT78 406 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 MARCH7Q9H992 704 aa17.08■□□□□ 0.32
RPS28-202ENST00000449223 FGF20Q9NP95 211 aaPredicted RBP17.08■□□□□ 0.32
RPS28-202ENST00000449223 OR6C65A6NJZ3 312 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 TTLL8A6PVC2 850 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 CDK1P06493 297 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 C10orf128Q5T292 105 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 RNLSQ5VYX0 342 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 OR2A2Q6IF42 318 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 AHSA2Q719I0 299 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 AAED1Q7RTV5 226 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 PRSS48Q7RTY5 328 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 CD163Q86VB7 1156 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 MCEMP1Q8IX19 187 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 TUSC5Q8IXB3 177 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 POMGNT2Q8NAT1 580 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 TSPAN14Q8NG11 270 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 MYDGFQ969H8 173 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 LGALS12Q96DT0 336 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 JAM3Q9BX67 310 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 GLTPQ9NZD2 209 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 NOSIPQ9Y314 301 aaKnown RBP17.07■□□□□ 0.32
RPS28-202ENST00000449223 SHANK1Q9Y566 2161 aa17.07■□□□□ 0.32
RPS28-202ENST00000449223 PTGES3LE9PB15 166 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 SLC16A7O60669 478 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 SLC43A1O75387 559 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 AGTR1P30556 359 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 CSNK1A1P48729 337 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 TUBA4AP68366 448 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 FMODQ06828 376 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 ST3GAL4Q11206 333 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 RTL6Q6ICC9 239 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 ZNF585AQ6P3V2 769 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 LRFN4Q6PJG9 635 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 ZNF773Q6PK81 442 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 SLC25A47Q6Q0C1 308 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 PROKR2Q8NFJ6 384 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 SGCDQ92629 289 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 TM9SF2Q99805 663 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 LINC00470Q9BZP3 86 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 SRA1Q9HD15 236 aaKnown RBP17.06■□□□□ 0.32
RPS28-202ENST00000449223 PCDHGB1Q9Y5G3 927 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 FAM215AQ9Y5M1 114 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 ZGRF1Q86YA3 2104 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 IGSF10Q6WRI0 2623 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 A0A087WXM4 84 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 RGS10O43665 173 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 MRPL33O75394 65 aaKnown RBP17.06■□□□□ 0.32
RPS28-202ENST00000449223 FADS2O95864 444 aaKnown RBP17.06■□□□□ 0.32
RPS28-202ENST00000449223 IGHA1P01876 353 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 TPOP07202 933 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 SBK2P0C263 348 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 SMIM18P0DKX4 95 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 ABOP16442 354 aa17.06■□□□□ 0.32
RPS28-202ENST00000449223 EEF1B2P24534 225 aaKnown RBP17.06■□□□□ 0.32
RPS28-202ENST00000449223 DCKP27707 260 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms