RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 C1QTNF6Q9BXI9 259 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 MRPL13Q9BYD1 178 aaKnown RBP12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 MOV10Q9HCE1 1003 aaKnown RBP12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 CCM2LQ9NUG4 571 aaPredicted RBP12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 AKAP9Q99996 3911 aa12.28□□□□□ -0.44
GTF3C3-206ENST00000448539 ARPC4-TTLL3A0A0A6YYG9 625 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 ARHGEF9O43307 516 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 SEC14L2O76054 403 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 FARS2O95363 451 aaKnown RBP12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 GSTM3P21266 225 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC6A6P31641 620 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 GSSP48637 474 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 ARHGDIAP52565 204 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 RFX4Q33E94 735 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 GPR139Q6DWJ6 353 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 RPL13AP3Q6NVV1 102 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 LRFN4Q6PJG9 635 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 AQP11Q8NBQ7 271 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 PAPD5Q8NDF8 572 aaKnown RBP12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 OR10G2Q8NGC3 310 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 OR52L1Q8NGH7 329 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 GIPC3Q8TF64 312 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 HDAC2Q92769 488 aaKnown RBP12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 GPX7Q96SL4 187 aaPredicted RBP12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 OR52D1Q9H346 318 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 VNN3Q9NY84 501 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 DNAJB9Q9UBS3 223 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 IL20RAQ9UHF4 553 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 MGAT4BQ9UQ53 548 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 ADAM18Q9Y3Q7 739 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 IER3IP1Q9Y5U9 82 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 TACC2O95359 2948 aa12.27□□□□□ -0.45
GTF3C3-206ENST00000448539 TEX13CA0A0J9YWL9 993 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 DPRXA6NFQ7 191 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 DEAF1O75398 565 aaPredicted RBP12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 GASTP01350 101 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 B4GALT1P15291 398 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF26P17031 533 aaPredicted RBP12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 PTAFRP25105 342 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 SDHAP31040 664 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 GUCA1AP43080 201 aaPredicted RBP12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 TUBA1BP68363 451 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 TUBA4AP68366 448 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 BSPH1Q075Z2 132 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 KRR1Q13601 381 aaKnown RBP12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 HIST3H3Q16695 136 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 THEM4Q5T1C6 240 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 THSD4Q6ZMP0 1018 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF704Q6ZNC4 412 aaPredicted RBP12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 TUBA1AQ71U36 451 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 DEPDC4Q8N2C3 294 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF519Q8TB69 540 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 NSMAFQ92636 917 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 GTPBP3Q969Y2 492 aaKnown RBP12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 Q96M85 177 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 RAB3IPQ96QF0 476 aaPredicted RBP12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 HS3ST6Q96QI5 342 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 KCNS3Q9BQ31 491 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 IFT27Q9BW83 186 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 UBTD1Q9HAC8 227 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 SMURF2Q9HAU4 748 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 NRIP3Q9NQ35 241 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 NPAP1Q9NZP6 1156 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 PDP1Q9P0J1 537 aaPredicted RBP12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 RNF115Q9Y4L5 304 aa12.26□□□□□ -0.45
GTF3C3-206ENST00000448539 SOCS2O14508 198 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 ABCD4O14678 606 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 TIPRLO75663 272 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 PPP1R3DO95685 299 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 OR8G3PP0DMU2 310 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 CD79AP11912 226 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 APEHP13798 732 aaKnown RBP12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 CD40P25942 277 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 NOS3P29474 1203 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 CCNIQ14094 377 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF770Q6IQ21 691 aaPredicted RBP12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 SEZ6L2Q6UXD5 910 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF620Q6ZNG0 422 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF627Q7L945 461 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 FAM122BQ7Z309 247 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 CDH24Q86UP0 819 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 JAZF1Q86VZ6 243 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 SLCO4A1Q96BD0 722 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 RADILQ96JH8 1075 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 SAMD8Q96LT4 415 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 ERMAPQ96PL5 475 aaPredicted RBP12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 DGCR6LQ9BY27 220 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 KCNN2Q9H2S1 579 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 NELFAQ9H3P2 528 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 PLEKHF2Q9H8W4 249 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF556Q9HAH1 456 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 TMEM38BQ9NVV0 291 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 AP4S1Q9Y587 144 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 CDH10Q9Y6N8 788 aa12.25□□□□□ -0.45
GTF3C3-206ENST00000448539 ARRDC5A6NEK1 342 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 H7C1C5 153 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 IMPA2O14732 288 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 AHCYL1O43865 530 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms