RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 PPIL1Q9Y3C6 166 aa8.59□□□□□ -1.03
SYNPO2-204ENST00000448416 TGM5O43548 720 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 SERPINA5P05154 406 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 CKMP06732 381 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 THPOP40225 353 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 POU3F4P49335 361 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 PRLHRP49683 370 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 SNRPNP63162 240 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 SKP1P63208 163 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 IL13RA1P78552 427 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 USF2Q15853 346 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 Q499Y3 187 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 DPPA2Q7Z7J5 298 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 C17orf64Q86WR6 236 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC35F3Q8IY50 421 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 BPIFB2Q8N4F0 458 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 NUP43Q8NFH3 380 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 OR5T3Q8NGG3 340 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 MAFIPQ8WZ33 124 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 PHB2Q99623 299 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 PTPN18Q99952 460 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 AIF1LQ9BQI0 150 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF426Q9BUY5 554 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 GPR174Q9BXC1 333 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 PRO1933Q9H354 126 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 MYOZ1Q9NP98 299 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 CYTL1Q9NRR1 136 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 PARPBPQ9NWS1 579 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 CA14Q9ULX7 337 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 SPTBP11277 2137 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 A0A087WV48 116 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 TSTD3H0UI37 97 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 H3BSH0 61 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 PPM1DO15297 605 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 NDUFS4O43181 175 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 CD1CP29017 333 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 GRPRP30550 384 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 DVL1P1P54792 670 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 GAS6Q14393 721 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 HMGN3Q15651 99 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 ARHGAP40Q5TG30 622 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 CLEC9AQ6UXN8 241 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 UBAC2Q8NBM4 344 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 OR10D4PQ8NGN7 298 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 SFXN5Q8TD22 340 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 ADAMTS15Q8TE58 950 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 MESP1Q9BRJ9 268 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 TBC1D3EA0A087X179 549 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 VAMP1P23763 118 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 LPAR6P43657 344 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 RSU1Q15404 277 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 TMCO2Q7Z6W1 182 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 LYG2Q86SG7 212 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 CXorf40AQ8TE69 158 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF689Q96CS4 500 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 SMIM8Q96KF7 97 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 TNFRSF13CQ96RJ3 184 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 KLF16Q9BXK1 252 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 NRSN2Q9GZP1 204 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 PRSS16Q9NQE7 514 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 USP36Q9P275 1121 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 PISDQ9UG56 409 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 MED31Q9Y3C7 131 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 ADAM18Q9Y3Q7 739 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 DENND4CQ5VZ89 1909 aa8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 MDC1Q14676 2089 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-204ENST00000448416 BLOC1S5-TXNDC5H3BN57 136 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 SRPX2O60687 465 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ALOX12BO75342 701 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ADH1CP00326 375 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 PMP2P02689 132 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 CRHP06850 196 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 PPP1R1AQ13522 171 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 PNLIPRP3Q17RR3 467 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ALG11Q2TAA5 492 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 GDF6Q6KF10 455 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ARHGAP11AQ6P4F7 1023 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TGIF2LXQ8IUE1 241 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 FRMD1Q8N878 549 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 OR6K6Q8NGW6 343 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 GPX8Q8TED1 209 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TAC3Q9UHF0 121 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 FRMPD3Q5JV73 1810 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TVP23AA6NH52 213 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 MOSPD3O75425 235 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZIC2O95409 532 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 CYB5AP00167 134 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 HLA-GP17693 338 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 HOXC8P31273 242 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 MC3RP41968 323 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 RPS10P46783 165 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 RAB4BP61018 213 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 NKPD1Q17RQ9 610 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 UNQ6494/PRO21346Q6UXR6 183 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 PPP1R3BQ86XI6 285 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TMEM229BQ8NBD8 167 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 OR56B1Q8NGI3 324 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 MALSU1Q96EH3 234 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 NEU1Q99519 415 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms