RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 SNX18Q96RF0 628 aa12.36□□□□□ -0.43
CTSS-202ENST00000448301 HDHD5Q9BXW7 423 aa12.36□□□□□ -0.43
CTSS-202ENST00000448301 OR10A4Q9H209 315 aa12.36□□□□□ -0.43
CTSS-202ENST00000448301 SLC25A19Q9HC21 320 aa12.36□□□□□ -0.43
CTSS-202ENST00000448301 CRLF2Q9HC73 371 aa12.36□□□□□ -0.43
CTSS-202ENST00000448301 GPR35Q9HC97 309 aa12.36□□□□□ -0.43
CTSS-202ENST00000448301 GPR52Q9Y2T5 361 aa12.36□□□□□ -0.43
CTSS-202ENST00000448301 PRSS37A4D1T9 235 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 C16orf97H3BN30 126 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 CLDN1O95832 211 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 HIST1H1CP16403 213 aaKnown RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 POU1F1P28069 291 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 GRNP28799 593 aaKnown RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 CCKARP32238 428 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 GRK5P34947 590 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 UGT2B10P36537 528 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 PEX19P40855 299 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 GIPRP48546 466 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 RAD23AP54725 363 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 SH3BGRP55822 239 aaPredicted RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 CDK5Q00535 292 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 SLC34A1Q06495 639 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 CD47Q08722 323 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 RIPK1Q13546 671 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 GINS1Q14691 196 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 CEACAM16Q2WEN9 425 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 THEM4Q5T1C6 240 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 C10orf128Q5T292 105 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 LRFN4Q6PJG9 635 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 PTCHD4Q6ZW05 846 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 JAZF1Q86VZ6 243 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 ZNF433Q8N7K0 673 aaPredicted RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 C1orf162Q8NEQ5 155 aaPredicted RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 KISS1RQ969F8 398 aaPredicted RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 MCHR2Q969V1 340 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 BOD1Q96IK1 185 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 RBP7Q96R05 134 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 SLC29A1Q99808 456 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 GABARAPL3Q9BY60 117 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 C8orf4Q9NR00 106 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 VSX1Q9NZR4 365 aaPredicted RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 NKX1-2Q9UD57 310 aaPredicted RBP12.35□□□□□ -0.43
CTSS-202ENST00000448301 ORC6Q9Y5N6 252 aa12.35□□□□□ -0.43
CTSS-202ENST00000448301 SPTBN1Q01082 2364 aaKnown RBP12.34□□□□□ -0.43
CTSS-202ENST00000448301 SLC22A23A1A5C7 686 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 ZNF99A8MXY4 864 aaPredicted RBP12.34□□□□□ -0.43
CTSS-202ENST00000448301 PRSS44E7EML9 344 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 H7C1C5 153 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 C19orf84I3L1E1 186 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 LYZL6O75951 148 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 QDPRP09417 244 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 IGFBP2P18065 325 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 CDH2P19022 906 aaPredicted RBP12.34□□□□□ -0.43
CTSS-202ENST00000448301 IL32P24001 234 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 PEX2P28328 305 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 CDKN2AP42771 156 aaKnown RBP12.34□□□□□ -0.43
CTSS-202ENST00000448301 LCN6P62502 163 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 MYBPC1Q00872 1141 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTSS-202ENST00000448301 PTGES3Q15185 160 aaKnown RBP12.34□□□□□ -0.43
CTSS-202ENST00000448301 GABRA6Q16445 453 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 SLC35F1Q5T1Q4 408 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 OGFRL1Q5TC84 451 aaPredicted RBP12.34□□□□□ -0.43
CTSS-202ENST00000448301 BHLHA15Q7RTS1 189 aaPredicted RBP12.34□□□□□ -0.43
CTSS-202ENST00000448301 IQCF1Q8N6M8 205 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 SDR9C7Q8NEX9 313 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 STEAP2Q8NFT2 490 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 OR4K13Q8NH42 304 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
CTSS-202ENST00000448301 KLHL21Q9UJP4 597 aa12.34□□□□□ -0.43
CTSS-202ENST00000448301 CIB4A0PJX0 185 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 ZAR1LA6NP61 321 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 DHHO43323 396 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 RAD51DO75771 328 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 RENP00797 406 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 IFNGP01579 166 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 FMODQ06828 376 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 NPRL3Q12980 569 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 ZNF362Q5T0B9 420 aaPredicted RBP12.33□□□□□ -0.44
CTSS-202ENST00000448301 C9orf135Q5VTT2 229 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 LPCAT4Q643R3 524 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 OR7E24Q6IFN5 339 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 ACSM5Q6NUN0 579 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 LEG1Q6P5S2 330 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 SLC25A47Q6Q0C1 308 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 ZNF627Q7L945 461 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 C17orf78Q8N4C9 275 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 PACRGLQ8N7B6 248 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 ACBD4Q8NC06 268 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 OR52E2Q8NGJ4 325 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 OR1K1Q8NGR3 316 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 ZNF837Q96EG3 531 aaPredicted RBP12.33□□□□□ -0.44
CTSS-202ENST00000448301 MUS81Q96NY9 551 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 PSMG3-AS1Q96PY0 264 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 NMNAT3Q96T66 252 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 TEX12Q9BXU0 123 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 SYT4Q9H2B2 425 aa12.33□□□□□ -0.44
CTSS-202ENST00000448301 CMC2Q9NRP2 79 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms