RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 APOFQ13790 326 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 RNPS1Q15287 305 aaKnown RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 STK11Q15831 433 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 SGCAQ16586 387 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 C12orf73Q69YU5 71 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 TMEM154Q6P9G4 183 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 C16orf87Q6PH81 154 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 KLHL24Q6TFL4 600 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 UGT2A3Q6UWM9 527 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 CD300LDQ6UXZ3 194 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 NHLRC1Q6VVB1 395 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 FAM214BQ7L5A3 538 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 CXXC5Q7LFL8 322 aaKnown RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 CXorf67Q86X51 503 aaPredicted RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 ENTHD1Q8IYW4 607 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 TMEM123Q8N131 208 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 SLC43A2Q8N370 569 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 PARP8Q8N3A8 854 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 GPR137CQ8N3F9 429 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 LRRC18Q8N456 261 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 ARIH2OSQ8N7S6 290 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 ZNF511Q8NB15 262 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 RELL2Q8NC24 303 aaPredicted RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 ADPRHL1Q8NDY3 354 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 PROKR2Q8NFJ6 384 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 MBD3L2Q8NHZ7 208 aaPredicted RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 SGCDQ92629 289 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 RND1Q92730 232 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 MCHR2Q969V1 340 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 APH1AQ96BI3 265 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 STARD4Q96DR4 205 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 GMPPAQ96IJ6 420 aaPredicted RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 DMRTA2Q96SC8 542 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 TBX5Q99593 518 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 TM9SF2Q99805 663 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 ULBP2Q9BZM5 246 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 NUAK2Q9H093 628 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 VCX3BQ9H321 246 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 CRLF2Q9HC73 371 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 PAQR5Q9NXK6 330 aaPredicted RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 EMC3Q9P0I2 261 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 UPB1Q9UBR1 384 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 ERRFI1Q9UJM3 462 aaPredicted RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 PROCRQ9UNN8 238 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 COA3Q9Y2R0 106 aaPredicted RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 EMC9Q9Y3B6 208 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 TLN1Q9Y490 2541 aaKnown RBP6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 MPDZO75970 2070 aa6.67□□□□□ -1.34
SF3A3P1-201ENST00000446317 SLC22A23A1A5C7 686 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 A1L4Q6 167 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 PRSS37A4D1T9 235 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 PRR23D1E9PI22 279 aaPredicted RBP6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 PSMD9O00233 223 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 MAGEB4O15481 346 aaPredicted RBP6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 SELENOFO60613 162 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 RAD51DO75771 328 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 AGFG2O95081 481 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 RENP00797 406 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 IGHG1P01857 330 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 PRR23D2P0DMB1 279 aaPredicted RBP6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 B4GALT1P15291 398 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 ZNF3P17036 446 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 CTSSP25774 331 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 CAPZA2P47755 286 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 PCYT1AP49585 367 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 CDC42P60953 191 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 ARF1P84077 181 aaKnown RBP6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 FAM27E3Q08E93 113 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 TAF11Q15544 211 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 CEACAM16Q2WEN9 425 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 HIKESHIQ53FT3 197 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 ZNF362Q5T0B9 420 aaPredicted RBP6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 ZNF691Q5VV52 312 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 LRFN4Q6PJG9 635 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 CORO6Q6QEF8 472 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 TFAP2EQ6VUC0 442 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 LINC00346Q8IVM7 164 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 OR6V1Q8N148 313 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 LNX2Q8N448 690 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 RFLNBQ8N5W9 214 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 PACRGLQ8N7B6 248 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 GALNT11Q8NCW6 608 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 NPEPL1Q8NDH3 523 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 ZFAND2BQ8WV99 257 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 APH1BQ8WW43 257 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 DNAJC9Q8WXX5 260 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 SLC25A44Q96H78 314 aaPredicted RBP6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 ZC3HAV1LQ96H79 300 aaKnown RBP6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 LRR1Q96L50 414 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 SLC38A2Q96QD8 506 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 ZNF184Q99676 751 aaPredicted RBP6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 NDEL1Q9GZM8 345 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 SLCO5A1Q9H2Y9 848 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 SLC25A19Q9HC21 320 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 GPR35Q9HC97 309 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 SHANK1Q9Y566 2161 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 IGKV3D-15A0A087WSY6 115 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 E9PLN8 166 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 DNPH1O43598 174 aa6.66□□□□□ -1.34
SF3A3P1-201ENST00000446317 XPNPEP2O43895 674 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms