RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CST9LP1Q5W188 147 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 GATSQ8NAP1 163 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 HSD17B11Q8NBQ5 300 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TRMT2BQ96GJ1 504 aaKnown RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 TEPSINQ96N21 525 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 HHIPQ96QV1 700 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 GJB5O95377 273 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 SERPINA5P05154 406 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 SGCAQ16586 387 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 MRM1Q6IN84 353 aaKnown RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 SDHCQ99643 169 aaPredicted RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 CWH43Q9H720 699 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 C2orf42Q9NWW7 574 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 HIDE1A8MVS5 230 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 RANP62826 216 aaKnown RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 PDGFRLQ15198 375 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 OR11H4Q8NGC9 324 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 OR7D2Q96RA2 312 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 GOLT1BQ9Y3E0 138 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 BDP1A6H8Y1 2624 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 GPR179Q6PRD1 2367 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 MSTNO14793 375 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 WNT3P56703 355 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 PRRT3Q5FWE3 981 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 CCDC54Q8NEL0 328 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TMEM255BQ8WV15 326 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ZNF75AQ96N20 296 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ZMAT3Q9HA38 289 aaKnown RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 MSRAQ9UJ68 235 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 NALCNQ8IZF0 1738 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 AIFM1O95831 613 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TMEM225BP0DP42 221 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 MSR1P21757 451 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 CD81P60033 236 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 TLE4Q04727 773 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 INSL4Q14641 139 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 LDLRAD3Q86YD5 345 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 PPP1R1CQ8WVI7 109 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ELOA3CA0A087WX78 387 aaPredicted RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 LANCL1O43813 399 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 FRZBQ92765 325 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ZNF230Q9UIE0 474 aaPredicted RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 C1orf226A1L170 272 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 ZNF860A6NHJ4 632 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 C11orf98E9PRG8 122 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 STC2O76061 302 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 SLCO2B1O94956 709 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 FBP1P09467 338 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 GSK3AP49840 483 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 SNRPNP63162 240 aaKnown RBP7.26□□□□□ -1.25
SMG1-202ENST00000446231 GPR18Q14330 331 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 RCBTB1Q8NDN9 531 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 OR56B2PQ8NGI1 322 aa7.26□□□□□ -1.25
SMG1-202ENST00000446231 H7BYZ3 331 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 NDUFS1P28331 727 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 RGS7BPQ6MZT1 257 aaPredicted RBP7.25□□□□□ -1.25
SMG1-202ENST00000446231 ACOT4Q8N9L9 421 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 GHITMQ9H3K2 345 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.25□□□□□ -1.25
SMG1-202ENST00000446231 AKAP12Q02952 1782 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 XKRY2A2RUG3 117 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 LATO43561 262 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 APEHP13798 732 aaKnown RBP7.25□□□□□ -1.25
SMG1-202ENST00000446231 SELPP16109 830 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 FOXJ3Q9UPW0 622 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 ZNF888P0CJ79 500 aaPredicted RBP7.25□□□□□ -1.25
SMG1-202ENST00000446231 CPMP14384 443 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 CCDC71LQ8N9Z2 235 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 FAM210BQ96KR6 192 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 TM7SF3Q9NS93 570 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 C1orf123Q9NWV4 160 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 CCDC163A0A0D9SF12 145 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 A0A1B0GWA3 101 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 A6NIZ1 184 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 SERPINE2P07093 398 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 DAOP14920 347 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 FCGR2CP31995 323 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 RAP1BP61224 184 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 OR2L13Q8N349 312 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 PTGESO14684 152 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 SUSD5O60279 629 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 CSTBP04080 98 aaKnown RBP7.25□□□□□ -1.25
SMG1-202ENST00000446231 NMBP08949 121 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 PLA2G12AQ9BZM1 189 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 TXNRD2Q9NNW7 524 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 MTFP1Q9UDX5 166 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 TYRP1P17643 537 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 ENPP1P22413 925 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 PPIAP62937 165 aaKnown RBP7.25□□□□□ -1.25
SMG1-202ENST00000446231 ANKRD16Q6P6B7 361 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 ADGRE4PQ86SQ3 457 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 GALNT16Q8N428 558 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 ZNF485Q8NCK3 441 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 CAMTA1Q9Y6Y1 1673 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 M0QZQ0 153 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 HMGN4O00479 90 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 FFAR1O14842 300 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 SNAI1O95863 264 aaPredicted RBP7.25□□□□□ -1.25
SMG1-202ENST00000446231 VRK3Q8IV63 474 aa7.25□□□□□ -1.25
SMG1-202ENST00000446231 GMLQ99445 158 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms