RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 INPP5JQ15735 1006 aaPredicted RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 C3orf33Q6P1S2 294 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 FAM220AQ7Z4H9 259 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 CRIPAKQ8N1N5 446 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 OR4S1Q8NGB4 309 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ARL11Q969Q4 196 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 CCDC74AQ96AQ1 378 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ZNF251Q9BRH9 671 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 RXFP3Q9NSD7 469 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 UQCC1Q9NVA1 299 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 EPHA6Q9UF33 1036 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 MRM2Q9UI43 246 aaKnown RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 SERTAD3Q9UJW9 196 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 GTF2A1LQ9UNN4 478 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 OR1A2Q9Y585 309 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 A0A0B4J2E0 115 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 A0A1B0GX12 115 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 A0A1W2PPE3 182 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 H7C1C5 153 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 VEGFDO43915 354 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 EIF1BO60739 113 aaKnown RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 ST6GAL1P15907 406 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 MNDAP41218 407 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 EIF1P41567 113 aaKnown RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 LCN6P62502 163 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 CAP1Q01518 475 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
VPS52-212ENST00000445902 PEA15Q15121 130 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 GFOD2Q3B7J2 385 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 C2orf76Q3KRA6 126 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 LEG1Q6P5S2 330 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 NAA40Q86UY6 237 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 PLPP7Q8NBV4 271 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 DMBX1Q8NFW5 382 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 NUBPLQ8TB37 319 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ZBTB8AQ96BR9 441 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 PHYHIPLQ96FC7 376 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 SPSB2Q99619 263 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 ALG12Q9BV10 488 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 C1orf198Q9H425 327 aa12.69□□□□□ -0.38
VPS52-212ENST00000445902 A0A1B0GTI1 187 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 AGPAT2O15120 278 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 LAG3P18627 525 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 GABRA3P34903 492 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 RAB5BP61020 215 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 ZNF704Q6ZNC4 412 aaPredicted RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 SLC29A4Q7RTT9 530 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 ZNF761Q86XN6 746 aaPredicted RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 OR5AP2Q8NGF4 316 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 MRPL48Q96GC5 212 aaKnown RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 PITHD1Q9GZP4 211 aaPredicted RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 SRA1Q9HD15 236 aaKnown RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 UPB1Q9UBR1 384 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 CARHSP1Q9Y2V2 147 aaKnown RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 C13orf42A0A1B0GVH6 325 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 GRXCR1A8MXD5 290 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 TGM5O43548 720 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 RNGTTO60942 597 aaKnown RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 GPANK1O95872 356 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 ABOP16442 354 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 DDX6P26196 483 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPS52-212ENST00000445902 DEFB134Q4QY38 66 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 NKAPLQ5M9Q1 402 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 RNF44Q7L0R7 432 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 TSEN15Q8WW01 171 aaKnown RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 NXPE3Q969Y0 559 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 C14orf79Q96F83 325 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 MRI1Q9BV20 369 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 POTEKPQ9BYX7 375 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 RSPH9Q9H1X1 276 aaPredicted RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 GHRLQ9UBU3 117 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 RPH3AQ9Y2J0 694 aaPredicted RBP12.68□□□□□ -0.38
VPS52-212ENST00000445902 ENTPD2Q9Y5L3 495 aa12.68□□□□□ -0.38
VPS52-212ENST00000445902 ELOA3DA6NLF2 546 aaPredicted RBP12.67□□□□□ -0.38
VPS52-212ENST00000445902 UPK3AO75631 287 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 CD1AP06126 327 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 SMIM6P0DI80 62 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 ADRB3P13945 408 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 VAMP1P23763 118 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 HSD17B2P37059 387 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 RAB28P51157 221 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 SKP1P63208 163 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 GAS6Q14393 721 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 ELOA3BQ3SY89 546 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 ZNF813Q6ZN06 617 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 TMPPEQ6ZT21 453 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 BPIFB2Q8N4F0 458 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 ELOA3Q8NG57 546 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 ELP5Q8TE02 316 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 A0A1W2PQ45 241 aaPredicted RBP12.67□□□□□ -0.38
VPS52-212ENST00000445902 A0A1W2PQY0 241 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 COLCA2A8K830 154 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 AGR2O95994 175 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 CSRP1P21291 193 aaKnown RBP12.67□□□□□ -0.38
VPS52-212ENST00000445902 CST5P28325 142 aaPredicted RBP12.67□□□□□ -0.38
VPS52-212ENST00000445902 SDHAP31040 664 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 PBX2P40425 430 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 CEBPEQ15744 281 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 C5orf46Q6UWT4 87 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms