RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 PIN1P1O15428 100 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 ZNF264O43296 627 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 ADAM11O75078 769 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 DCNP07585 359 aaKnown RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 GIMD1P0DJR0 217 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 ARRB1P49407 418 aaPredicted RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 PLCXD2Q0VAA5 305 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 RNASE10Q5GAN6 216 aaKnown RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 C17orf107Q6ZR85 190 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 STEAP2Q8NFT2 490 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 OR51A4Q8NGJ6 313 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 OR6M1Q8NGM8 313 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 OR2G2Q8NGZ5 317 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 KLHDC7BQ96G42 594 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 MNTQ99583 582 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 SAV1Q9H4B6 383 aaPredicted RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 STEAP1Q9UHE8 339 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 PCDHGA9Q9Y5G4 932 aaKnown RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 LINC00862A6NCI5 91 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 EFCAB7A8K855 629 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 ZNF736B4DX44 427 aaPredicted RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 PPP3CBP16298 524 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 AKR1C2P52895 323 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 AKR1C1Q04828 323 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 PXKQ7Z7A4 578 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 LINC00346Q8IVM7 164 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 BPIFB2Q8N4F0 458 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 MIB2Q96AX9 1013 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 HAVCR1Q96D42 359 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 LINC00052Q96N35 136 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 GDF15Q99988 308 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 TPSD1Q9BZJ3 242 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 COPS7AQ9UBW8 275 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 CHRNA9Q9UGM1 479 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 PCDHGA5Q9Y5G8 931 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 TDRD6O60522 2096 aaKnown RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 MDC1Q14676 2089 aaKnown RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 A0A087WUJ7 227 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 TMEM82A0PJX8 343 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 METTL21EPA6NDL7 271 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 ACAA2P42765 397 aaKnown RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 TAGLNQ01995 201 aaKnown RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 ZP2Q05996 745 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 GAB4Q2WGN9 574 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 MARCH3Q86UD3 253 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 TMEM185AQ8NFB2 350 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 C3orf49Q96BT1 292 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 KTI12Q96EK9 354 aaPredicted RBP10.81□□□□□ -0.68
MSH6-204ENST00000445503 BMFQ96LC9 184 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 NTMQ9P121 344 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 SPAG17Q6Q759 2223 aa10.81□□□□□ -0.68
MSH6-204ENST00000445503 TRAV8-7A0A075B6U6 113 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 RHPN2P1A8MT19 583 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 SIGLEC5O15389 551 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 ACTBP60709 375 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 ACTG1P63261 375 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 SIGLEC14Q08ET2 396 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 C2orf76Q3KRA6 126 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 SLC35D3Q5M8T2 416 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 NUP54Q7Z3B4 507 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 ZNF440Q8IYI8 595 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 ANKRD9Q96BM1 317 aaPredicted RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 WDR89Q96FK6 387 aaPredicted RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 TMEM41AQ96HV5 264 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 POFUT1Q9H488 388 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 COL4A6Q14031 1691 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 NPIPA5E9PKD4 350 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 CYR61O00622 381 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 HCRTR1O43613 425 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 ZNF432O94892 652 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 UTS2O95399 124 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 HLA-AP01891 365 aaKnown RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 PRKXP51817 358 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 RPS15P62841 145 aaKnown RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 ARFRP1Q13795 201 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 NSDHLQ15738 373 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 C19orf47Q8N9M1 422 aaKnown RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 OR2AK2Q8NG84 335 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 OR10K1Q8NGX5 313 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 RADILQ96JH8 1075 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 TREM1Q9NP99 234 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 HAO2Q9NYQ3 351 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 GSKIPQ9P0R6 139 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 DHCR7Q9UBM7 475 aaKnown RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 MLXQ9UH92 298 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 NPIPA1Q9UND3 350 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 KLHDC2Q9Y2U9 406 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 SNRNP200O75643 2136 aaKnown RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 SRPX2O60687 465 aaPredicted RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 AKR7A3O95154 331 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 CXCL2P19875 107 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 ACHEP22303 614 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 TPMTP51580 245 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 ZP1P60852 638 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 RASGEF1BQ0VAM2 473 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 MAMDC2Q7Z304 686 aaPredicted RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 PHYHIPQ92561 330 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 LMF2Q9BU23 707 aaKnown RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 POLE3Q9NRF9 147 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 EPHA6Q9UF33 1036 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms