RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 A0A087WUJ7 227 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 SGCEO43556 437 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 GLCEO94923 617 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 UCHL1P09936 223 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 DIO1P49895 249 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 IDH3GP51553 393 aaPredicted RBP12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 RAC1P63000 192 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF141Q15928 474 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF565Q8N9K5 539 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 CHRNA10Q9GZZ6 450 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 EXO1Q9UQ84 846 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 ADAM18Q9Y3Q7 739 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 I3L521 148 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 LIFP15018 202 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 MLF1P58340 268 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 SLC35D3Q5M8T2 416 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 C3P1Q6ZMU1 363 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 TRMT10AQ8TBZ6 339 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 OIT3Q8WWZ8 545 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 ARHGDIGQ99819 225 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 SCNM1Q9BWG6 230 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 IL17BQ9UHF5 180 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 NUFIP1Q9UHK0 495 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 SOCS6O14544 535 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 CRYAAP02489 173 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 GNAO1P09471 354 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 RAB3BP20337 219 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 PPP5CP53041 499 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 PRKCDQ05655 676 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 ARSJQ5FYB0 599 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 THEM4Q5T1C6 240 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 NRG4Q8WWG1 115 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 CREB3L1Q96BA8 519 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 ZG16BQ96DA0 208 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF681Q96N22 645 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 TXNIPQ9H3M7 391 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 CDK1P06493 297 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 RPS23P62266 143 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 MOB3CQ70IA8 216 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 SPAG16Q8N0X2 631 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 GPR119Q8TDV5 335 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 CRLF2Q9HC73 371 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 DNAJB12Q9NXW2 375 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 FOXJ2Q9P0K8 574 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 CD40LGP29965 261 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 KISS1RQ969F8 398 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 FAM46BQ96A09 425 aa12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF701Q9NV72 531 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-204ENST00000444061 SURF4O15260 269 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 SEC14L2O76054 403 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 CASP3P42574 277 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 HERV-K104P61576 105 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 CD83Q01151 205 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 SMCO1Q147U7 214 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 MKXQ8IYA7 352 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 FAM109AQ8N4B1 249 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 OR5T2Q8NGG2 359 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 TNFAIP8L1Q8WVP5 186 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF582Q96NG8 517 aaPredicted RBP12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.36
SMARCA4-204ENST00000444061 FCER2P06734 321 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 CCL3P10147 92 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 CD59P13987 128 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 GABRA1P14867 456 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 ATP1B3P54709 279 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 ZNF169Q14929 603 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 RNPS1Q15287 305 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 MEP1BQ16820 701 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 KDM4DQ6B0I6 523 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 C3orf49Q96BT1 292 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 CCDC32Q9BV29 185 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 TGIF2Q9GZN2 237 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 SLC2A5P22732 501 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 HTR1FP30939 366 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 SMN1Q16637 294 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 CBLN3Q6UW01 205 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 DCXRQ7Z4W1 244 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 C9orf40Q8IXQ3 194 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 C11orf40Q8WZ69 217 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 AKAP1Q92667 903 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 SLC25A44Q96H78 314 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 SCGB3A2Q96PL1 93 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 PIKFYVEQ9Y2I7 2098 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 DNAJB6O75190 326 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 PITPNBP48739 271 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 GCNT2Q8N0V5 402 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 CA5BP1Q8WTZ4 195 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 LGALS12Q96DT0 336 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 TMEM43Q9BTV4 400 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 TIMM10BQ9Y5J6 103 aa12.77□□□□□ -0.37
SMARCA4-204ENST00000444061 A0A096LPE4 126 aa12.76□□□□□ -0.37
SMARCA4-204ENST00000444061 A0A0B4J2E0 115 aa12.76□□□□□ -0.37
SMARCA4-204ENST00000444061 A0A0X1KG70 313 aa12.76□□□□□ -0.37
SMARCA4-204ENST00000444061 A0A1B0GX12 115 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms