RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 LINC00114Q6XXX2 140 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 PATL1Q86TB9 770 aaKnown RBP11.84□□□□□ -0.51
PTPRE-203ENST00000442830 FUNDC1Q8IVP5 155 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 MSRB3Q8IXL7 192 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 CPEB3Q8NE35 698 aaKnown RBP11.84□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF519Q8TB69 540 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 SYNPRQ8TBG9 265 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 C11orf40Q8WZ69 217 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 ARHGDIGQ99819 225 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 KCNN2Q9H2S1 579 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 METTL17Q9H7H0 456 aaPredicted RBP11.84□□□□□ -0.51
PTPRE-203ENST00000442830 RNF121Q9H920 327 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 TMBIM4Q9HC24 238 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 HINT3Q9NQE9 182 aaKnown RBP11.84□□□□□ -0.51
PTPRE-203ENST00000442830 TMEM38BQ9NVV0 291 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF224Q9NZL3 707 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 LEF1Q9UJU2 399 aaPredicted RBP11.84□□□□□ -0.51
PTPRE-203ENST00000442830 DYSFO75923 2080 aa11.83□□□□□ -0.51
PTPRE-203ENST00000442830 IGLV3-9A0A075B6K5 115 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 TRAPPC13A5PLN9 417 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 C17orf100A8MU93 164 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 J3QLI3 93 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 DHHO43323 396 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 SERPINI2O75830 405 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 BCL10O95999 233 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 PNPP00491 289 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 HPXP02790 462 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 ZNF250P15622 560 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 GATA3P23771 443 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 LIMS1P48059 325 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 AQP5P55064 265 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 PCBP3P57721 371 aaKnown RBP11.83□□□□□ -0.52
PTPRE-203ENST00000442830 SRSF2Q01130 221 aaKnown RBP11.83□□□□□ -0.52
PTPRE-203ENST00000442830 NPTX1Q15818 432 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 CYP51A1Q16850 503 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 AGKQ53H12 422 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 ACSM5Q6NUN0 579 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 SLC16A14Q7RTX9 510 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 COMTD1Q86VU5 262 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 TSPEARQ8WU66 669 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 TIMD4Q96H15 378 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 LRRC37BQ96QE4 947 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 CPPED1Q9BRF8 314 aaPredicted RBP11.83□□□□□ -0.52
PTPRE-203ENST00000442830 RBM4Q9BWF3 364 aaKnown RBP11.83□□□□□ -0.52
PTPRE-203ENST00000442830 POLR2J2Q9GZM3 115 aaKnown RBP11.83□□□□□ -0.52
PTPRE-203ENST00000442830 PCDHAC1Q9H158 963 aa11.83□□□□□ -0.52
PTPRE-203ENST00000442830 POLR2J3Q9H1A7 115 aaKnown RBP11.83□□□□□ -0.52
PTPRE-203ENST00000442830 A0A0G2JMP0 313 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 A0A0X1KG70 313 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 A0A1W2PRG6 482 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 LYNX1G3V0Z9 82 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 TRIM77I1YAP6 450 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 RP2O75695 350 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 IGF2P01344 180 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 PGA4P0DJD7 388 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 PGA3P0DJD8 388 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 LYNX1P0DP58 116 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 DRD4P21917 467 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 COL8A2P25067 703 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 AQP1P29972 269 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 APLNRP35414 380 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 COMPP49747 757 aaPredicted RBP11.82□□□□□ -0.52
PTPRE-203ENST00000442830 IDH3AP50213 366 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 DAP3P51398 398 aaKnown RBP11.82□□□□□ -0.52
PTPRE-203ENST00000442830 CLRN1P58418 232 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 ACTG1P63261 375 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 MSMPQ1L6U9 139 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 PAGE3Q5JUK9 113 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 ENTPD8Q5MY95 495 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 NANOGNBQ7Z5D8 188 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 LSRQ86X29 649 aaPredicted RBP11.82□□□□□ -0.52
PTPRE-203ENST00000442830 SKA3Q8IX90 412 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 RBM15BQ8NDT2 890 aaKnown RBP11.82□□□□□ -0.52
PTPRE-203ENST00000442830 SEMA6DQ8NFY4 1073 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 OR4M2Q8NGB6 313 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 SLC26A7Q8TE54 656 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 ADAMTS16Q8TE57 1224 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 DECR2Q9NUI1 292 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 MRGBPQ9NV56 204 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 SLAMF8Q9P0V8 285 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 TAAR3PQ9P1P4 343 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 CGGBP1Q9UFW8 167 aaPredicted RBP11.82□□□□□ -0.52
PTPRE-203ENST00000442830 TRIM33Q9UPN9 1127 aa11.82□□□□□ -0.52
PTPRE-203ENST00000442830 IGHV1-69-2A0A0G2JMI3 117 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 CLDN25C9JDP6 229 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 MCIDASD6RGH6 385 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 H3BSA7 217 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 M0R3H8 397 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 ANGPT2O15123 496 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 ZNF500O60304 480 aaPredicted RBP11.81□□□□□ -0.52
PTPRE-203ENST00000442830 TPST2O60704 377 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 CH25HO95992 272 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 LCKP06239 509 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 ASAH2BP0C7U1 165 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 UMPSP11172 480 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 NAT2P11245 290 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 TCN1P20061 433 aaPredicted RBP11.81□□□□□ -0.52
PTPRE-203ENST00000442830 CD247P20963 164 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 LIPAP38571 399 aa11.81□□□□□ -0.52
PTPRE-203ENST00000442830 CRYBB2P43320 205 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms