RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 C1orf162Q8NEQ5 155 aaPredicted RBP14.04□□□□□ -0.16
USP39-205ENST00000442708 OR52N5Q8NH56 324 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 HSD17B8Q92506 261 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 HTRA1Q92743 480 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 MCHR2Q969V1 340 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 PKP2Q99959 881 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 SLC24A3Q9HC58 644 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 NPAP1Q9NZP6 1156 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 GRHPRQ9UBQ7 328 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 SLC25A15Q9Y619 301 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 CDH10Q9Y6N8 788 aa14.04□□□□□ -0.16
USP39-205ENST00000442708 CACNA1DQ01668 2161 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 ABCA12Q86UK0 2595 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 ZNF503-AS2A6NEH8 195 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 ZNF99A8MXY4 864 aaPredicted RBP14.03□□□□□ -0.16
USP39-205ENST00000442708 CENPBD1B2RD01 187 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 ARHGEF9O43307 516 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 DHHO43323 396 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 TXNDC12O95881 172 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 SDHAP31040 664 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 ZNF133P52736 654 aaPredicted RBP14.03□□□□□ -0.16
USP39-205ENST00000442708 KRTAP10-9P60411 292 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 TGFBR3Q03167 851 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 DBPQ10586 325 aaPredicted RBP14.03□□□□□ -0.16
USP39-205ENST00000442708 TBRG1Q3YBR2 411 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 CLEC12AQ5QGZ9 265 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 OR7E24Q6IFN5 339 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 ANKRD16Q6P6B7 361 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 PTCHD4Q6ZW05 846 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 OR5K1Q8NHB7 308 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 MAGEE2Q8TD90 523 aaPredicted RBP14.03□□□□□ -0.16
USP39-205ENST00000442708 C14orf79Q96F83 325 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 ZNF570Q96NI8 536 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 ERMAPQ96PL5 475 aaPredicted RBP14.03□□□□□ -0.16
USP39-205ENST00000442708 SEMA6AQ9H2E6 1030 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 B3GAT2Q9NPZ5 323 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 IL20Q9NYY1 176 aa14.03□□□□□ -0.16
USP39-205ENST00000442708 A0A1W2PPR1 153 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 ERICH4A6NGS2 130 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 A6NIZ1 184 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 BHLHE40O14503 412 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 SOCS2O14508 198 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 CTAG2O75638 210 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 FCGR1AP12314 374 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 B4GALT1P15291 398 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 GSTM3P21266 225 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 SLC6A6P31641 620 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 CDKN2AP42771 156 aaKnown RBP14.02□□□□□ -0.17
USP39-205ENST00000442708 DAPP51397 102 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 SH3BGRP55822 239 aaPredicted RBP14.02□□□□□ -0.17
USP39-205ENST00000442708 RAP1BP61224 184 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 RAP1AP62834 184 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 TUBA1BP68363 451 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 TUBA4AP68366 448 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 TLE4Q04727 773 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 KRR1Q13601 381 aaKnown RBP14.02□□□□□ -0.17
USP39-205ENST00000442708 PPA1Q15181 289 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 FAM205BPQ63HN1 556 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 SLC25A47Q6Q0C1 308 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 KLHL24Q6TFL4 600 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 TUBA1AQ71U36 451 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 ZNF627Q7L945 461 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 HDDC2Q7Z4H3 204 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 P2RY8Q86VZ1 359 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 C17orf78Q8N4C9 275 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 OR4Q3Q8NH05 313 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 NRBF2Q96F24 287 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 HS3ST6Q96QI5 342 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 FOXB1Q99853 325 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 ALG12Q9BV10 488 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 IFT27Q9BW83 186 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 C1QTNF6Q9BXI9 259 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 NDEL1Q9GZM8 345 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 ZNF226Q9NYT6 803 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 UGT2A1Q9Y4X1 527 aa14.02□□□□□ -0.17
USP39-205ENST00000442708 ABCA4P78363 2273 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 SLC22A23A1A5C7 686 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 CASKO14936 926 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 ARPC3O15145 178 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 HRGP04196 525 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 APEHP13798 732 aaKnown RBP14.01□□□□□ -0.17
USP39-205ENST00000442708 HIST1H1CP16403 213 aaKnown RBP14.01□□□□□ -0.17
USP39-205ENST00000442708 CDAP32320 146 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 RPS6KA3P51812 740 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 CD47Q08722 323 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 ETFDHQ16134 617 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 SLC35F1Q5T1Q4 408 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 C10orf128Q5T292 105 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 GPR139Q6DWJ6 353 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 ZFP1Q6P2D0 407 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 FAHD1Q6P587 224 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 ZNF813Q6ZN06 617 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 NSMAFQ92636 917 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 PIK3IP1Q96FE7 263 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 CENPNQ96H22 339 aaPredicted RBP14.01□□□□□ -0.17
USP39-205ENST00000442708 USB1Q9BQ65 265 aaKnown RBP14.01□□□□□ -0.17
USP39-205ENST00000442708 BDH2Q9BUT1 245 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 SMURF2Q9HAU4 748 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 S100A14Q9HCY8 104 aa14.01□□□□□ -0.17
USP39-205ENST00000442708 RASSF1Q9NS23 344 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms