RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 TMEM255AQ5JRV8 349 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 CLIP4Q8N3C7 705 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 ADPRHL1Q8NDY3 354 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 GEMIN6Q8WXD5 167 aaKnown RBP11.72□□□□□ -0.53
LINC00642-202ENST00000442515 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 UPRTQ96BW1 309 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 TXNDC15Q96J42 360 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 DCLRE1CQ96SD1 692 aaKnown RBP11.72□□□□□ -0.53
LINC00642-202ENST00000442515 EGLN1Q9GZT9 426 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 PRDM13Q9H4Q3 707 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 SLC6A13Q9NSD5 602 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 ASIC5Q9NY37 505 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 ASH2LQ9UBL3 628 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 CHST2Q9Y4C5 530 aa11.72□□□□□ -0.53
LINC00642-202ENST00000442515 F5H0A9 414 aaPredicted RBP11.71□□□□□ -0.53
LINC00642-202ENST00000442515 MS4A18H0YCH9 400 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 DYNC1I1O14576 645 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 COPEO14579 308 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 CLPXO76031 633 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 NQO1P15559 274 aaKnown RBP11.71□□□□□ -0.53
LINC00642-202ENST00000442515 HOXC5Q00444 222 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 EMX2Q04743 252 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 MAD2L1Q13257 205 aaPredicted RBP11.71□□□□□ -0.53
LINC00642-202ENST00000442515 C2orf68Q2NKX9 166 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 MS4A18Q3C1V0 323 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 ESCO2Q56NI9 601 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 COX20Q5RI15 118 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 KPRPQ5T749 579 aaPredicted RBP11.71□□□□□ -0.53
LINC00642-202ENST00000442515 C6orf89Q6UWU4 347 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 BRD3OSQ6XYD6 125 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 PIWIL3Q7Z3Z3 882 aaKnown RBP11.71□□□□□ -0.53
LINC00642-202ENST00000442515 SLC22A24Q8N4F4 322 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 VPS37AQ8NEZ2 397 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 OR1J1Q8NGS3 322 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 IPCEF1Q8WWN9 437 aaPredicted RBP11.71□□□□□ -0.53
LINC00642-202ENST00000442515 SLC38A4Q969I6 547 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 SH3GL3Q99963 347 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 SLC30A2Q9BRI3 323 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 C1orf198Q9H425 327 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 TCF7L1Q9HCS4 588 aa11.71□□□□□ -0.53
LINC00642-202ENST00000442515 IGKV1D-42A0A075B6H8 117 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 A0A087WUJ7 227 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 PLSCR5A0PG75 271 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 ZNF726A6NNF4 738 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 CSNK1A1P48729 337 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 ANXA11P50995 505 aaKnown RBP11.7□□□□□ -0.54
LINC00642-202ENST00000442515 PROK1P58294 105 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 TXNL4AP83876 142 aaKnown RBP11.7□□□□□ -0.54
LINC00642-202ENST00000442515 SPANXN4Q5MJ08 99 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 SPATA46Q5T0L3 261 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 FAM205BPQ63HN1 556 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 C5orf46Q6UWT4 87 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 NHLRC1Q6VVB1 395 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
LINC00642-202ENST00000442515 REC114Q7Z4M0 266 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 LRRC34Q8IZ02 419 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 OR10S1Q8NGN2 331 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 LINC01006Q8NI28 216 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 SLC41A3Q96GZ6 507 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 TMEM106BQ9NUM4 274 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 IL20RAQ9UHF4 553 aa11.7□□□□□ -0.54
LINC00642-202ENST00000442515 SACSQ9NZJ4 4579 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 TRAV36DV7A0A075B6V5 113 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 ERLIN1O75477 346 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 SERPINI2O75830 405 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 TGDSO95455 350 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 ADH4P08319 380 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 ALDH3A1P30838 453 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 MPV17P39210 176 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 BTG1P62324 171 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 PAX2Q02962 417 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 LARS2Q15031 903 aaKnown RBP11.69□□□□□ -0.54
LINC00642-202ENST00000442515 ZMYND11Q15326 602 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 FAM189A2Q15884 450 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 SMU1Q2TAY7 513 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 RPS26P11Q5JNZ5 115 aaPredicted RBP11.69□□□□□ -0.54
LINC00642-202ENST00000442515 SAMD5Q5TGI4 173 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 TMEM53Q6P2H8 277 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 BTNL3Q6UXE8 466 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 LRRN1Q6UXK5 716 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 WDR88Q6ZMY6 472 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 NET1Q7Z628 596 aaPredicted RBP11.69□□□□□ -0.54
LINC00642-202ENST00000442515 C4orf33Q8N1A6 199 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 TMEM86BQ8N661 226 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 TESCQ96BS2 214 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 CCDC115Q96NT0 180 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 RNF121Q9H920 327 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 TMEM38BQ9NVV0 291 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 P2RX2Q9UBL9 471 aa11.69□□□□□ -0.54
LINC00642-202ENST00000442515 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
LINC00642-202ENST00000442515 CCDC154A6NI56 674 aa11.68□□□□□ -0.54
LINC00642-202ENST00000442515 ENTPD5O75356 428 aa11.68□□□□□ -0.54
LINC00642-202ENST00000442515 FARS2O95363 451 aaKnown RBP11.68□□□□□ -0.54
LINC00642-202ENST00000442515 CD55P08174 381 aa11.68□□□□□ -0.54
LINC00642-202ENST00000442515 MYZAPP0CAP1 466 aa11.68□□□□□ -0.54
LINC00642-202ENST00000442515 VSIG8P0DPA2 414 aa11.68□□□□□ -0.54
LINC00642-202ENST00000442515 PUDPQ08623 228 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms