RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 HDAC2Q92769 488 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 MCHR2Q969V1 340 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 KATNB1Q9BVA0 655 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 DENND2DQ9H6A0 471 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 NRIP3Q9NQ35 241 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 CRNNQ9UBG3 495 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 AKAP6Q13023 2319 aa13.14□□□□□ -0.31
CSNK1E-210ENST00000442216 EBAG9O00559 213 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 HS3ST1O14792 307 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 CCNB2O95067 398 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 CST1P01037 141 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 APEHP13798 732 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF26P17031 533 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 DNASE1P24855 282 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF83P51522 516 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF84P51523 738 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 GPR139Q6DWJ6 353 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 RPL13AP3Q6NVV1 102 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 PGBD2Q6P3X8 592 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 SMARCD3Q6STE5 483 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 DPY19L2P2Q6ZN68 376 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 ASRGL1Q7L266 308 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 FAM122BQ7Z309 247 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 DPPA2Q7Z7J5 298 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 NANOS1Q8WY41 292 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 TSPAN32Q96QS1 320 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 RBP7Q96R05 134 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 GPA33Q99795 319 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 LIME1Q9H400 295 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 CCM2LQ9NUG4 571 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 TMEM38BQ9NVV0 291 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 GRHPRQ9UBQ7 328 aa13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 SAMHD1Q9Y3Z3 626 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-210ENST00000442216 ROS1P08922 2347 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 M0R1B8 84 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 ABCD4O14678 606 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 TMCC2O75069 709 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 PLAUP00749 431 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 IGKV3-15P01624 115 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 IGLV1-44P01699 117 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 OR8G3PP0DMU2 310 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 CBR1P16152 277 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 SDHAP31040 664 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 ARR3P36575 388 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 RPS6KA3P51812 740 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 FXYD6P3P58550 94 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 ERVK-25P63136 954 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 TOP3AQ13472 1001 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 KEAP1Q14145 624 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 MICAQ29983 383 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 RFX4Q33E94 735 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF770Q6IQ21 691 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 IGFN1Q86VF2 1251 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF611Q8N823 705 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 SYT14Q8NB59 555 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 NRGNQ92686 78 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 MBD6Q96DN6 1003 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 SLC38A2Q96QD8 506 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 OR52D1Q9H346 318 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 B3GNT2Q9NY97 397 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 FBXL3Q9UKT7 428 aa13.12□□□□□ -0.31
CSNK1E-210ENST00000442216 ARRDC5A6NEK1 342 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 SHISA9B4DS77 424 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 XKRYO14609 159 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 IMPA2O14732 288 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 ARPC3O15145 178 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 FKBP6O75344 327 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 UBL3O95164 117 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 ATE1O95260 518 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 FARS2O95363 451 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 TXNDC12O95881 172 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 B4GALT1P15291 398 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 SLC6A6P31641 620 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 CD47Q08722 323 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF672Q499Z4 452 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 SLC25A47Q6Q0C1 308 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 THSD4Q6ZMP0 1018 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 SLC22A24Q8N4F4 322 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 IL17RDQ8NFM7 739 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 LILRB1Q8NHL6 650 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 FANK1Q8TC84 345 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 AKAP1Q92667 903 aaKnown RBP eCLIP13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 PIGTQ969N2 578 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 FBXW5Q969U6 566 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 ZNF570Q96NI8 536 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 C1QTNF6Q9BXI9 259 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 UBTD1Q9HAC8 227 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 VNN3Q9NY84 501 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 ADAM18Q9Y3Q7 739 aa13.11□□□□□ -0.31
CSNK1E-210ENST00000442216 TACC2O95359 2948 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 PLCE1Q9P212 2302 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 IGHV1-18A0A0C4DH31 117 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 GNGT2O14610 69 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 ARHGEF9O43307 516 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 IDH3BO43837 385 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 SEC14L2O76054 403 aa13.1□□□□□ -0.31
CSNK1E-210ENST00000442216 GASTP01350 101 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms