RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 HGDQ93099 445 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 DDIT4LQ96D03 193 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 KTI12Q96EK9 354 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 ZC3HAV1LQ96H79 300 aaKnown RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 MRGPRX4Q96LA9 322 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 INTS14Q96SY0 518 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 NEURL2Q9BR09 285 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 PTDSS2Q9BVG9 487 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 SLC25A18Q9H1K4 315 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 RERGLQ9H628 205 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 WDR76Q9H967 626 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 RPRD1BQ9NQG5 326 aaKnown RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 QPCTLQ9NXS2 382 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 VSX1Q9NZR4 365 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 ABRACLQ9P1F3 81 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 GPN3Q9UHW5 284 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-209ENST00000440653 GNG8Q9UK08 70 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 FBXL4Q9UKA2 621 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 TBC1D24Q9ULP9 559 aa8.25□□□□□ -1.09
HDAC6-209ENST00000440653 COL27A1Q8IZC6 1860 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 CSMD2Q7Z408 3487 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 LOC102723996A0A087X1L8 192 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TRBV2A0A0J9YWF9 115 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 A0A1W2PNV4 684 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 A0A1W2PRG6 482 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TMEM72A0PK05 275 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TMEM212A6NML5 194 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 CENPBD1B2RD01 187 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 LRRN3E7EW58 273 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SNPHO15079 494 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 LRRTM2O43300 516 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SELENOFO60613 162 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SERPINI2O75830 405 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 IGHEP01854 428 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 FBXO45P0C2W1 286 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 PRKAR1AP10644 381 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SLC2A2P11168 524 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 PRKCAP17252 672 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 CRABP1P29762 137 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 EVX1P49640 407 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF41P51814 821 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SCAND1P57086 179 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 RPL27P61353 136 aaKnown RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SLC3A1Q07837 685 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 RASGEF1BQ0VAM2 473 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 IL18Q14116 193 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 EXT1Q16394 746 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TBR1Q16650 682 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 GXYLT1Q4G148 440 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TP53I3Q53FA7 332 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ACSM3Q53FZ2 586 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 HSD17B12Q53GQ0 312 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SLC25A53Q5H9E4 307 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 PHF19Q5T6S3 580 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 DESI1Q6ICB0 168 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 MRPL14Q6P1L8 145 aaKnown RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 CCBE1Q6UXH8 406 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 B3GLCTQ6Y288 498 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF517Q6ZMY9 492 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SSX6Q7RTT6 188 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TMPRSS9Q7Z410 1059 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 CEACAM19Q7Z692 300 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TIGD4Q8IY51 512 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 CADM3Q8N126 398 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF454Q8N9F8 522 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 C19orf18Q8NEA5 215 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 MFSD8Q8NHS3 518 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ABHD4Q8TB40 342 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ENKURQ8TC29 256 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SLC25A43Q8WUT9 341 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 GHSRQ92847 366 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TAAR8Q969N4 342 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 DCLRE1CQ96SD1 692 aaKnown RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SOSTQ9BQB4 213 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 COMMD4Q9H0A8 199 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 SLITRK2Q9H156 845 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 TXNIPQ9H3M7 391 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 FANCFQ9NPI8 374 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 POLE4Q9NR33 117 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ACOXLQ9NUZ1 547 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ALKBH4Q9NXW9 302 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 KLRF1Q9NZS2 232 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 AKAP7Q9P0M2 348 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-209ENST00000440653 PPP4R1LQ9P1A2 415 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 COMMD3Q9UBI1 195 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 PISDQ9UG56 409 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 LAMP5Q9UJQ1 280 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF281Q9Y2X9 895 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 WIF1Q9Y5W5 379 aa8.24□□□□□ -1.09
HDAC6-209ENST00000440653 MTORP42345 2549 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 A0A1W2PQ72 361 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 PRSS37A4D1T9 235 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 CDC14CA4D256 554 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 PMS2P1A4D2B8 440 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 FAM25AB3EWG3 89 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 FAM25CB3EWG5 89 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 FAM25GB3EWG6 89 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 BOLA2-SMG1P6H3BVE0 249 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 MEN1O00255 615 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms