RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 SYNPO2LQ9H987 977 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 PRDM7Q9NQW5 492 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 EPHA6Q9UF33 1036 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 ZNF230Q9UIE0 474 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 GPR34Q9UPC5 381 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 ASCC3Q8N3C0 2202 aaKnown RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 IDSB3KWA1 339 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 RNGTTO60942 597 aaKnown RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 RPN2P04844 631 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 S100A6P06703 90 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 CSF1P09603 554 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 TMEM52BQ4KMG9 183 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 DHRS7BQ6IAN0 325 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 ARHGAP11AQ6P4F7 1023 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 OR2L13Q8N349 312 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 C12orf45Q8N5I9 185 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 OR1S2Q8NGQ3 325 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 RGP1Q92546 391 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 MS4A6EQ96DS6 147 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 NUS1Q96E22 293 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 ZNF681Q96N22 645 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 MS4A4EQ96PG1 132 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 MENTQ9BUN1 341 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 FAM117AQ9C073 453 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 EXO5Q9H790 373 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 IL21RQ9HBE5 538 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 MEPEQ9NQ76 525 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 PCDHB10Q9UN67 800 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 RAB19A4D1S5 217 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 LINC00587B1AMM8 73 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 IFNA4P05014 189 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 CD27P26842 260 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 CERS1P27544 350 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 PLA2G7Q13093 441 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 DUSP8Q13202 625 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 ZIC1Q15915 447 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 SWI5Q1ZZU3 235 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 LY6G6FQ5SQ64 297 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 ABHD17CQ6PCB6 329 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 STAC2Q6ZMT1 411 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 BEST3Q8N1M1 668 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 OR4K13Q8NH42 304 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 CMSS1Q9BQ75 279 aaKnown RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 ZNF471Q9BX82 626 aaPredicted RBP7.79□□□□□ -1.16
HPS4-206ENST00000439453 GAREM1Q9H706 876 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 TAS2R8Q9NYW2 309 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 OR10H1Q9Y4A9 318 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 ZNF780BQ9Y6R6 833 aa7.79□□□□□ -1.16
HPS4-206ENST00000439453 RIF1Q5UIP0 2472 aaKnown RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 IGKV1-8A0A0C4DH67 115 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 BCL2L11O43521 198 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SLC25A12O75746 678 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 GTF2F2P13984 249 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 ADCYAP1P18509 176 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 BDKRB2P30411 391 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SLC6A6P31641 620 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 BCL6P41182 706 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 KCNJ3P48549 501 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 AKR1C2P52895 323 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 AKR1C1Q04828 323 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 GGTLC2Q14390 218 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SHBQ15464 509 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 ARHGAP11BQ3KRB8 267 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 FAM209BQ5JX69 171 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 MRPL2Q5T653 305 aaKnown RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 GLT8D1Q68CQ7 371 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SLC22A18ASQ8N1D0 253 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 OR7G2Q8NG99 324 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 OR14A16Q8NHC5 309 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 GLYATL2Q8WU03 294 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SFT2D1Q8WV19 159 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 TCF7L1Q9HCS4 588 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SLC23A2Q9UGH3 650 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 EDARQ9UNE0 448 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 ZNF337Q9Y3M9 751 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 PTPRBP23467 1997 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 A0A1W2PQU0 124 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 OR6C68A6NDL8 312 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 H0Y8X5 98 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 XRCC3O43542 346 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 THBS1P07996 1170 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 AKAIN1P0CW23 69 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SPP1P10451 314 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 NANOS3P60323 173 aaKnown RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 LTBQ06643 244 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 PAN3Q58A45 887 aaKnown RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 AMZ2Q86W34 360 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SPAG16Q8N0X2 631 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 LINC01555Q8NAE3 123 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 C2CD4CQ8TF44 421 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 ARSGQ96EG1 525 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 PHYHIPLQ96FC7 376 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 VRK1Q99986 396 aaPredicted RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 SLITRK2Q9H156 845 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 TSPAN10Q9H1Z9 355 aaPredicted RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 ASF1BQ9NVP2 202 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 PIEZO1Q92508 2521 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 TBC1D3KA0A087X1G2 549 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 OR14I1A6ND48 311 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 TBC1D3FA6NER0 549 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms