RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 MRPL49Q13405 166 aaKnown RBP11.22□□□□□ -0.61
SCLT1-202ENST00000439369 CAMK2DQ13557 499 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 MAD2L1BPQ15013 274 aaPredicted RBP11.22□□□□□ -0.61
SCLT1-202ENST00000439369 C4orf17Q53FE4 359 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 SLC35D3Q5M8T2 416 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 C10orf128Q5T292 105 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 AADACL4Q5VUY2 407 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 NXNL2Q5VZ03 156 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 PLXDC2Q6UX71 529 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 TFAP2EQ6VUC0 442 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 C3P1Q6ZMU1 363 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 NUFIP2Q7Z417 695 aaKnown RBP11.22□□□□□ -0.61
SCLT1-202ENST00000439369 ZBTB46Q86UZ6 589 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 ENTHD1Q8IYW4 607 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 RPRMLQ8N4K4 120 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 MARVELD2Q8N4S9 558 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 HINT3Q9NQE9 182 aaKnown RBP11.22□□□□□ -0.61
SCLT1-202ENST00000439369 CLN6Q9NWW5 311 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF226Q9NYT6 803 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 BOD1L1Q8NFC6 3051 aa11.22□□□□□ -0.61
SCLT1-202ENST00000439369 A0A0G2JNJ9 132 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF587BE7ETH6 402 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 CCL21O00585 134 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 DVL2O14641 736 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 MSTNO14793 375 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 KHDRBS3O75525 346 aaKnown RBP11.21□□□□□ -0.61
SCLT1-202ENST00000439369 CGAP01215 116 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 PRB1P04280 392 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 SIRPAP78324 504 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 FOXF2Q12947 444 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 MED21Q13503 144 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 NRN1LQ496H8 165 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 C1QTNF12Q5T7M4 302 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 TSPO2Q5TGU0 170 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 LCN1P1Q5VSP4 162 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 FBXW9Q5XUX1 488 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 PLBD1Q6P4A8 553 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 SLC25A47Q6Q0C1 308 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 CPOQ8IVL8 374 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 CNEP1R1Q8N9A8 125 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 SYT14Q8NB59 555 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 ASB5Q8WWX0 329 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 PTP4A1Q93096 173 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF775Q96BV0 537 aaPredicted RBP11.21□□□□□ -0.61
SCLT1-202ENST00000439369 STARD4Q96DR4 205 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 IL4I1Q96RQ9 567 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 ULBP2Q9BZM5 246 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 SYT4Q9H2B2 425 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 H2AFY2Q9P0M6 372 aaPredicted RBP11.21□□□□□ -0.61
SCLT1-202ENST00000439369 Q9UFV3 132 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 SH3BGRL2Q9UJC5 107 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 PROCRQ9UNN8 238 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 GPR52Q9Y2T5 361 aa11.21□□□□□ -0.61
SCLT1-202ENST00000439369 ARHGAP21Q5T5U3 1957 aa11.21□□□□□ -0.62
SCLT1-202ENST00000439369 PHF3Q92576 2039 aaKnown RBP11.2□□□□□ -0.62
SCLT1-202ENST00000439369 IGLV1-36A0A0B4J1U3 117 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 SLC22A31A6NKX4 558 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 DHHO43323 396 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 KRT33AO76009 404 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 CLIC3O95833 236 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 QDPRP09417 244 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 SPI1P17947 270 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 SLC2A5P22732 501 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 ZNF84P51523 738 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 CXCR4P61073 352 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 GLO1Q04760 184 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 P2RY6Q15077 328 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 CARD17Q5XLA6 110 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 KRT80Q6KB66 452 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 LRFN4Q6PJG9 635 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 Q6ZT83 130 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 BEND4Q6ZU67 534 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 FOXL2NBQ6ZUU3 175 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 ZNF627Q7L945 461 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 BTLAQ7Z6A9 289 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 MRGPRGQ86SM5 289 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 WDFY1Q8IWB7 410 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 CYB561A3Q8NBI2 242 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 NAXEQ8NCW5 288 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 MCHR2Q969V1 340 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 BOD1Q96IK1 185 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 ZNF582Q96NG8 517 aaPredicted RBP11.2□□□□□ -0.62
SCLT1-202ENST00000439369 NUAK2Q9H093 628 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 RPRD1BQ9NQG5 326 aaKnown RBP11.2□□□□□ -0.62
SCLT1-202ENST00000439369 RASSF1Q9NS23 344 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 SLC7A10Q9NS82 523 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 PLCXD1Q9NUJ7 323 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 HAO2Q9NYQ3 351 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 COQ3Q9NZJ6 369 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 UPB1Q9UBR1 384 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 WARS2Q9UGM6 360 aaKnown RBP11.2□□□□□ -0.62
SCLT1-202ENST00000439369 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCLT1-202ENST00000439369 B9D1Q9UPM9 204 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 LRCH1Q9Y2L9 728 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 SVILO95425 2214 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 DOCK7Q96N67 2140 aa11.2□□□□□ -0.62
SCLT1-202ENST00000439369 FAM183AA6NL82 134 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 H7C1C5 153 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 M0R129 80 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 SLC16A7O60669 478 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms