RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ERVFRD-1P60508 538 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 CNN3Q15417 329 aaKnown RBP8.9□□□□□ -0.98
RTN4-211ENST00000438462 MTX3Q5HYI7 312 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 EXOSC6Q5RKV6 272 aaKnown RBP8.9□□□□□ -0.98
RTN4-211ENST00000438462 DCST2Q5T1A1 773 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 MBNL2Q5VZF2 373 aaKnown RBP8.9□□□□□ -0.98
RTN4-211ENST00000438462 C10orf99Q6UWK7 81 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 ZNF627Q7L945 461 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 KDM8Q8N371 416 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 LRRC57Q8N9N7 239 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 PIK3C3Q8NEB9 887 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 SLC25A40Q8TBP6 338 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 STAG3L4Q8TBR4 150 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 MAIP1Q8WWC4 291 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 PMM1Q92871 262 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 OR2V2Q96R30 315 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 OR2J1Q9GZK6 312 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 NOL11Q9H8H0 719 aaKnown RBP8.9□□□□□ -0.98
RTN4-211ENST00000438462 SMURF1Q9HCE7 757 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 MIEF1Q9NQG6 463 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 SCOCQ9UIL1 159 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 POFUT2Q9Y2G5 429 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 KPTNQ9Y664 436 aa8.9□□□□□ -0.98
RTN4-211ENST00000438462 TP73O15350 636 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 SCN2BO60939 215 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 IFNA6P05013 189 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 ALDOBP05062 364 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 CNTFRP26992 372 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 HTR5AP47898 357 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 KCNJ1P48048 391 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 GP2P55259 537 aaKnown RBP8.89□□□□□ -0.99
RTN4-211ENST00000438462 SEL1L2Q5TEA6 688 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 RNF165Q6ZSG1 346 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 C8orf86Q6ZUL3 223 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 PEX26Q7Z412 305 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 TMEM123Q8N131 208 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 SELENOMQ8WWX9 145 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 ATP6V1E2Q96A05 226 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 OR2M2Q96R28 347 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 P2RX4Q99571 388 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 FOXB1Q99853 325 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 MMADHCQ9H3L0 296 aaPredicted RBP8.89□□□□□ -0.99
RTN4-211ENST00000438462 BRF2Q9HAW0 419 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 ABHD10Q9NUJ1 306 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 ONECUT1Q9UBC0 465 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 IL19Q9UHD0 177 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 OSGIN1Q9UJX0 560 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 NFU1Q9UMS0 254 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 RASD1Q9Y272 281 aa8.89□□□□□ -0.99
RTN4-211ENST00000438462 TIMM8AO60220 97 aaPredicted RBP8.88□□□□□ -0.99
RTN4-211ENST00000438462 BCAS1O75363 584 aaPredicted RBP8.88□□□□□ -0.99
RTN4-211ENST00000438462 TSPAN8P19075 237 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 MYCNOSP40205 109 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 CCNG1P51959 295 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 CARD17Q5XLA6 110 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 EMBQ6PCB8 327 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 C16orf89Q6UX73 402 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 CENPVQ7Z7K6 275 aaPredicted RBP8.88□□□□□ -0.99
RTN4-211ENST00000438462 IGFN1Q86VF2 1251 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 ZNF575Q86XF7 245 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 SKA3Q8IX90 412 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 C19orf18Q8NEA5 215 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 AJUBAQ96IF1 538 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 STACQ99469 402 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 TRIM5Q9C035 493 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 C1orf198Q9H425 327 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 DUSP22Q9NRW4 184 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 NMRK1Q9NWW6 199 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 ERVK-18Q9QC07 812 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 VPS29Q9UBQ0 182 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 DNAH17Q9UFH2 4485 aa8.88□□□□□ -0.99
RTN4-211ENST00000438462 MIF4GDA9UHW6 222 aaKnown RBP8.87□□□□□ -0.99
RTN4-211ENST00000438462 SEC14L6B5MCN3 397 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 IFNL4K9M1U5 179 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 FNTAP49354 379 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 ANXA11P50995 505 aaKnown RBP8.87□□□□□ -0.99
RTN4-211ENST00000438462 POLR2HP52434 150 aaKnown RBP8.87□□□□□ -0.99
RTN4-211ENST00000438462 C2orf80Q0P641 193 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 PFKFB4Q16877 469 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 ZCCHC12Q6PEW1 402 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 Q6ZR03 302 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 C18orf65Q6ZTR6 163 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 ZNF572Q7Z3I7 529 aaPredicted RBP8.87□□□□□ -0.99
RTN4-211ENST00000438462 ISCA2Q86U28 154 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 TMEM219Q86XT9 240 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 OR1J2Q8NGS2 313 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 TUBGCP3Q96CW5 907 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 MAGEB18Q96M61 343 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 DUX3Q96PT4 197 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 ZNF347Q96SE7 839 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 PTDSS2Q9BVG9 487 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 TAPBPLQ9BX59 468 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 PIGUQ9H490 435 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 TBK1Q9UHD2 729 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 KCNE5Q9UJ90 142 aa8.87□□□□□ -0.99
RTN4-211ENST00000438462 CCDC189A1A4V9 331 aa8.86□□□□□ -0.99
RTN4-211ENST00000438462 PRAMEF27A3QJZ7 478 aa8.86□□□□□ -0.99
RTN4-211ENST00000438462 SURF4O15260 269 aa8.86□□□□□ -0.99
RTN4-211ENST00000438462 FSTL3O95633 263 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms