RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SLA2Q9H6Q3 261 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 SEMA4GQ9NTN9 838 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 TIMM9Q9Y5J7 89 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 LTN1O94822 1766 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 RPS10-NUDT3A0A1W2PQS6 291 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 MEIS3P2A8K0S8 358 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF785A8K8V0 405 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 OR7A17O14581 309 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 FBXO24O75426 580 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 B3GALNT1O75752 331 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 CYC1P08574 325 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 MYF6P23409 242 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 RPS10P46783 165 aaKnown RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 TANGO2Q6ICL3 276 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 SYT9Q86SS6 491 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 VRK2Q86Y07 508 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 GPR26Q8NDV2 337 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 OR8U1Q8NH10 309 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 SMAP2Q8WU79 429 aaPredicted RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 MOB3AQ96BX8 217 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 ALG12Q9BV10 488 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 TCFL5Q9UL49 500 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 LAMP3Q9UQV4 416 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 TESK1Q15569 626 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 LETMD1Q6P1Q0 360 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 C17orf78Q8N4C9 275 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 SIRT6Q8N6T7 355 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 KHSRPQ92945 711 aaKnown RBP eCLIP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 ARSGQ96EG1 525 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 NOX4Q9NPH5 578 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 DLL4Q9NR61 685 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 A0A0B4J203 849 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 TNFRSF1AP19438 455 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 RPL7L1Q6DKI1 246 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 H1FNTQ75WM6 255 aaPredicted RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ISCA2Q86U28 154 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 OR5AS1Q8N127 324 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 SVBPQ8N300 66 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 OR13C9Q8NGT0 318 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 TRMT61AQ96FX7 289 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 JAM3Q9BX67 310 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 CRLF2Q9HC73 371 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 CNOT2Q9NZN8 540 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 EXO1Q9UQ84 846 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 OR5G3P0C626 314 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 LIPCP11150 499 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 Q1RN00 199 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 OR13J1Q8NGT2 312 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 KISS1RQ969F8 398 aaPredicted RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ELSPBP1Q96BH3 223 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 DHCR7Q9UBM7 475 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 RAB22AQ9UL26 194 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 CTNSO60931 367 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ORM1P02763 201 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 PLXDC2Q6UX71 529 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ANKRD13BQ86YJ7 626 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 MYH13Q9UKX3 1938 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 SLC35E2P0CK97 266 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ELAVL1Q15717 326 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 OR8G2PQ6IF36 304 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 DPY19L2P2Q6ZN68 376 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 TMEM200AQ86VY9 491 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ARFGAP1Q8N6T3 406 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ETV7Q9Y603 341 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ANKRD26Q9UPS8 1709 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 AMTP48728 403 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 MEOX1P50221 254 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ZXDBP98169 803 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 COL9A2Q14055 689 aaPredicted RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 GRINAQ7Z429 371 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 LINC01599Q8WXQ3 324 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 CCDC74AQ96AQ1 378 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 BIRC8Q96P09 236 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 TIMM10BQ9Y5J6 103 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 TCAPO15273 167 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 EIF4E2O60573 245 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 CD1CP29017 333 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 APOOLQ6UXV4 268 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 SLC35D2Q76EJ3 337 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 LGI3Q8N145 548 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 PRSS35Q8N3Z0 413 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 OR2AK2Q8NG84 335 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ONECUT1Q9UBC0 465 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 PURGQ9UJV8 347 aaKnown RBP10.33□□□□□ -0.76
SCN4A-201ENST00000435607 DNAJC15Q9Y5T4 150 aa10.33□□□□□ -0.76
SCN4A-201ENST00000435607 ARPC4-TTLL3A0A0A6YYG9 625 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 BHLHE40O14503 412 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 AREGP15514 252 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 LDLRAD1Q5T700 205 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SLC38A5Q8WUX1 472 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 ZNF251Q9BRH9 671 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 GSTO2Q9H4Y5 243 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 PGAP2Q9UHJ9 254 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 S100A8P05109 93 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SFTPCP11686 197 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 IRS1P35568 1242 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 EIF2DP41214 584 aaKnown RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 BTNL8Q6UX41 500 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SPRED1Q7Z699 444 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms