RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 CSNK1A1P48729 337 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 RPL27P61353 136 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 ETFDHQ16134 617 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 HIST3H3Q16695 136 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 SMARCD3Q6STE5 483 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 PTCHD4Q6ZW05 846 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 FGFBP3Q8TAT2 258 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 FANK1Q8TC84 345 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 GIPC3Q8TF64 312 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 ZNF566Q969W8 418 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 MUS81Q96NY9 551 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 KCNK17Q96T54 332 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 PKP2Q99959 881 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 LINC00470Q9BZP3 86 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 NRIP3Q9NQ35 241 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 GLTPQ9NZD2 209 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 CCDC168Q8NDH2 2452 aa13.22□□□□□ -0.29
HLA-DQB1-205ENST00000434651 DEFB108AA8MXU0 73 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 SOCS2O14508 198 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 ARHGEF9O43307 516 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 HNRNPRO43390 633 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 CNOT4O95628 575 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 CD14P08571 375 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 PATE4P0C8F1 98 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 CDAP32320 146 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 RFX4Q33E94 735 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 ZNF620Q6ZNG0 422 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 OR1K1Q8NGR3 316 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 BCL2L2Q92843 193 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 MCHR2Q969V1 340 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 NMD3Q96D46 503 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 TSSK2Q96PF2 358 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 ULBP2Q9BZM5 246 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 SMURF2Q9HAU4 748 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 NOX3Q9HBY0 568 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 REV1Q9UBZ9 1251 aa13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 ANKRD17O75179 2603 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB1-205ENST00000434651 HTR3EA5X5Y0 456 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 OR5H1A6NKK0 313 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 RPL36A-HNRNPH2H7BZ11 118 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 GPANK1O95872 356 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 PLAUP00749 431 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 IGHMP01871 453 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 B4GALT1P15291 398 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 LOXP28300 417 aaPredicted RBP13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 CDKN2AP42771 156 aaKnown RBP13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 CLRN1P58418 232 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 PRPS1P60891 318 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 TLE4Q04727 773 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 ATP6AP1Q15904 470 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 KLHL24Q6TFL4 600 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 MYPOPQ86VE0 399 aaPredicted RBP13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 IQCF1Q8N6M8 205 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 ARIH2OSQ8N7S6 290 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 NOXO1Q8NFA2 376 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 STEAP2Q8NFT2 490 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 NSMAFQ92636 917 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 DACH2Q96NX9 599 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 LIME1Q9H400 295 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 SEC61A2Q9H9S3 476 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 NDRG3Q9UGV2 375 aa13.21□□□□□ -0.3
HLA-DQB1-205ENST00000434651 A6NNC1 897 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 DCTN6O00399 190 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 MITFO75030 526 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 CTAG2O75638 210 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 SCG5P05408 212 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 DAPP51397 102 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 DAP3P51398 398 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 CD47Q08722 323 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 DYNC1I2Q13409 638 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 TBRG1Q3YBR2 411 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 OR4Q3Q8NH05 313 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 POP5Q969H6 163 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 LRR1Q96L50 414 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 ADAD1Q96M93 576 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 IFT27Q9BW83 186 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 HDHD5Q9BXW7 423 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 DGCR6LQ9BY27 220 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 FN3KQ9H479 309 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 ZNF224Q9NZL3 707 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 GRHPRQ9UBQ7 328 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 KCNN3Q9UGI6 736 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 SLC25A15Q9Y619 301 aa13.2□□□□□ -0.3
HLA-DQB1-205ENST00000434651 AKAP8O43823 692 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 DEAF1O75398 565 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 IGHG1P01857 330 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 HIST1H1CP16403 213 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 FASP25445 335 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 PCYT1AP49585 367 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 ZNF83P51522 516 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 SPOCK1Q08629 439 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 SLC36A3Q495N2 470 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 ZNF362Q5T0B9 420 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 OR4K13Q8NH42 304 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 FAM222BQ8WU58 562 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 NEUROG1Q92886 237 aa13.19□□□□□ -0.3
HLA-DQB1-205ENST00000434651 PIK3IP1Q96FE7 263 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms