RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 NXF5Q9H1B4 397 aaKnown RBP6.73□□□□□ -1.33
COL17A1-204ENST00000433822 MMP28Q9H239 520 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 PPIL3Q9H2H8 161 aaKnown RBP6.73□□□□□ -1.33
COL17A1-204ENST00000433822 TP63Q9H3D4 680 aaPredicted RBP6.73□□□□□ -1.33
COL17A1-204ENST00000433822 WDR76Q9H967 626 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 LMAN1LQ9HAT1 526 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 DDX28Q9NUL7 540 aaKnown RBP6.73□□□□□ -1.33
COL17A1-204ENST00000433822 SOHLH2Q9NX45 425 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 NLKQ9UBE8 527 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 NUFIP1Q9UHK0 495 aaKnown RBP6.73□□□□□ -1.33
COL17A1-204ENST00000433822 FBXL4Q9UKA2 621 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 TMEM184BQ9Y519 407 aaPredicted RBP6.73□□□□□ -1.33
COL17A1-204ENST00000433822 ALG5Q9Y673 324 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 CACNG2Q9Y698 323 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 CLCA3PQ9Y6N3 262 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 ITPR1Q14643 2758 aa6.73□□□□□ -1.33
COL17A1-204ENST00000433822 MPDZO75970 2070 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 AKAP13Q12802 2813 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 TRBV5-7A0A0A0MS05 114 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 TEX13CA0A0J9YWL9 993 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 A0A1B0GVI7 797 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 A0A1B0GX78 115 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 A0A1W2PRG6 482 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 OR6C70A6NIJ9 312 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 IFITM5A6NNB3 132 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 GABARAPH6UMI1 98 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ETV2O00321 342 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 TFECO14948 347 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 OR2T1O43869 369 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ZNF254O75437 659 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 UPK3AO75631 287 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 HIST1H2ABP04908 130 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ANKRD34CP0C6C1 535 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 CD37P11049 281 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 NAGAP17050 411 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 SRMP19623 302 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 FBLP22087 321 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 MST1P26927 711 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 IL12BP29460 328 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 BTCP35070 178 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ACVR1BP36896 505 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 CDKN2AP42771 156 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 P2RX1P51575 399 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 MECP2P51608 486 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 CAPZA1P52907 286 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 GFERP55789 205 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 OR10A3P58181 314 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 CTXN1P60606 82 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ROM1Q03395 351 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 SSBP1Q04837 148 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 EGR4Q05215 589 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 RPL18Q07020 188 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 RASGEF1BQ0VAM2 473 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ZP4Q12836 540 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 FAPQ12884 760 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 CBFBQ13951 182 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 SLC36A2Q495M3 483 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 Q499Y3 187 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 TP53I3Q53FA7 332 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ZNF57Q68EA5 555 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ZC3H14Q6PJT7 736 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 B3GLCTQ6Y288 498 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ZNF782Q6ZMW2 699 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 CREB3L2Q70SY1 520 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 BTN2A1Q7KYR7 527 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 HIST3H2AQ7L7L0 130 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 SLC29A4Q7RTT9 530 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 MAMDC2Q7Z304 686 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 SPEM1Q8N4L4 309 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 LSM14AQ8ND56 463 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 NLGN4YQ8NFZ3 816 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 OR1N1Q8NGS0 311 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 OR8K3Q8NH51 312 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 OR56B4Q8NH76 319 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 PHOSPHO1Q8TCT1 267 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 GPR148Q8TDV2 347 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 CAPSLQ8WWF8 208 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 HIST1H2ACQ93077 130 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 HGDQ93099 445 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 WDR89Q96FK6 387 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 MAP6Q96JE9 813 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 Q96M85 177 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 TGM7Q96PF1 710 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ABHD1Q96SE0 405 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 UTP23Q9BRU9 249 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 RBCK1Q9BYM8 510 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 SEMA4CQ9C0C4 833 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 HDHD2Q9H0R4 259 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 GHITMQ9H3K2 345 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ZNF768Q9H5H4 540 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 CCDC86Q9H6F5 360 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 EMC7Q9NPA0 242 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 FANCFQ9NPI8 374 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 SLC17A5Q9NRA2 495 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 VSX1Q9NZR4 365 aaPredicted RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 WNT16Q9UBV4 365 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 COPS7AQ9UBW8 275 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 PISDQ9UG56 409 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 GNG8Q9UK08 70 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 FBXL3Q9UKT7 428 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms