RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 GSSP48637 474 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 LCN6P62502 163 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 KRR1Q13601 381 aaKnown RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 GK3PQ14409 553 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 KPNB1Q14974 876 aaKnown RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 CLEC12AQ5QGZ9 265 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 ARMC4Q5T2S8 1044 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 RPL13AP3Q6NVV1 102 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 TMEM108Q6UXF1 575 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 THSD4Q6ZMP0 1018 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 DPY19L2P2Q6ZN68 376 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 CDC20BQ86Y33 519 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 ARIH2OSQ8N7S6 290 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 LRRC75AQ8NAA5 344 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 MAGEE2Q8TD90 523 aaPredicted RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 NANOS1Q8WY41 292 aaKnown RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 HDAC2Q92769 488 aaKnown RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 BCL2L2Q92843 193 aaPredicted RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 MCHR2Q969V1 340 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 UTP4Q969X6 686 aaKnown RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 SLCO4A1Q96BD0 722 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 RASD2Q96D21 266 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 SAMD8Q96LT4 415 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 DENND2DQ9H6A0 471 aaPredicted RBP13.6□□□□□ -0.23
TREX1-201ENST00000433541 EGLN3Q9H6Z9 239 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 UBTD1Q9HAC8 227 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 POU2F3Q9UKI9 436 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 SLC25A15Q9Y619 301 aa13.6□□□□□ -0.23
TREX1-201ENST00000433541 A0A1W2PPL8 197 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 DEFB108AA8MXU0 73 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 CENPBD1B2RD01 187 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 KLF4O43474 513 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 PTP4A3O75365 173 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 SOX14O95416 240 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 SLC2A10O95528 541 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 FCGR1AP12314 374 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 ZNF26P17031 533 aaPredicted RBP13.59□□□□□ -0.23
TREX1-201ENST00000433541 FASP25445 335 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 SDHAP31040 664 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 GABPB1Q06547 395 aaPredicted RBP13.59□□□□□ -0.23
TREX1-201ENST00000433541 FMODQ06828 376 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 BSPH1Q075Z2 132 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 NPRL3Q12980 569 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 FHL1Q13642 323 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 RFX4Q33E94 735 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 GPR139Q6DWJ6 353 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 ZNF620Q6ZNG0 422 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 ATG16L2Q8NAA4 619 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 PAPD5Q8NDF8 572 aaKnown RBP13.59□□□□□ -0.23
TREX1-201ENST00000433541 FNDC8Q8TC99 324 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 ALG12Q9BV10 488 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 SEC61A2Q9H9S3 476 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 OBP2BQ9NPH6 170 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 CDH10Q9Y6N8 788 aa13.59□□□□□ -0.23
TREX1-201ENST00000433541 ANKRD17O75179 2603 aaKnown RBP13.59□□□□□ -0.23
TREX1-201ENST00000433541 ITPR2Q14571 2701 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 H3BN98 237 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 ABCD4O14678 606 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 SIAH2O43255 324 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 ZNF23P17027 643 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 CENPAP49450 140 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 KRTAP10-9P60411 292 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 THEM4Q5T1C6 240 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 ADAM5Q6NVV9 412 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 LRFN4Q6PJG9 635 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 C10orf67Q8IYJ2 551 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 DEPDC4Q8N2C3 294 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 CLDN22Q8N7P3 220 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 WDR31Q8NA23 367 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 ZNF519Q8TB69 540 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 TEX47Q8TBZ9 253 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 PYDC1Q8WXC3 89 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 RADILQ96JH8 1075 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 LURAP1Q96LR2 239 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 KCNK17Q96T54 332 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 FEVQ99581 238 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 BDH2Q9BUT1 245 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 MRPL13Q9BYD1 178 aaKnown RBP13.58□□□□□ -0.24
TREX1-201ENST00000433541 KCNN2Q9H2S1 579 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 RNF121Q9H920 327 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 NRIP3Q9NQ35 241 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 NPAP1Q9NZP6 1156 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 EDARQ9UNE0 448 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 RNF115Q9Y4L5 304 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 APCP25054 2843 aa13.58□□□□□ -0.24
TREX1-201ENST00000433541 HRNRQ86YZ3 2850 aaPredicted RBP13.57□□□□□ -0.24
TREX1-201ENST00000433541 AKAP6Q13023 2319 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 LRBAP50851 2863 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 RAB36O95755 333 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 RENP00797 406 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 HLA-HP01893 362 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 OR8G3PP0DMU2 310 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
TREX1-201ENST00000433541 PRKACGP22612 351 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 POU1F1P28069 291 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 FXYD6P3P58550 94 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 PIGFQ07326 219 aa13.57□□□□□ -0.24
TREX1-201ENST00000433541 SGCAQ16586 387 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms