RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 KDM6BO15054 1643 aa4.28□□□□□ -1.72
USP54-206ENST00000433394 TONSLQ96HA7 1378 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 TRPM2O94759 1503 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 SPHKAPQ2M3C7 1700 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 A0A0B4J2A0 478 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 C12orf77C9JDV5 145 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 CLOCKO15516 846 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 IGLV1-47P01700 117 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 IGHV2-5P01817 119 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 KRT6AP02538 564 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 RBMXP38159 391 aaKnown RBP4.27□□□□□ -1.73
USP54-206ENST00000433394 TFPI2P48307 235 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 SUB1P53999 127 aaKnown RBP eCLIP4.27□□□□□ -1.73
USP54-206ENST00000433394 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
USP54-206ENST00000433394 MERTKQ12866 999 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 PRPSAP1Q14558 356 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 CNIH2Q6PI25 160 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 H2AFVQ71UI9 128 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 SPAG16Q8N0X2 631 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 C11orf42Q8N5U0 333 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 EID2Q8N6I1 236 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 ZNF557Q8N988 423 aaPredicted RBP4.27□□□□□ -1.73
USP54-206ENST00000433394 PLPPR1Q8TBJ4 325 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 FCRL1Q96LA6 429 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 GSDMAQ96QA5 445 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 FAIM2Q9BWQ8 316 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 NCOR1P1Q9H4R4 102 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 TMEM185BQ9H7F4 350 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 SHPKQ9UHJ6 478 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 MROH1Q8NDA8 1641 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 CCDC144AA2RUR9 1427 aa4.27□□□□□ -1.73
USP54-206ENST00000433394 MROH2AA6NES4 1674 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 KDM5AP29375 1690 aaKnown RBP4.26□□□□□ -1.73
USP54-206ENST00000433394 TRBV11-1A0A0K0K1C0 115 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 LRRIQ4A6NIV6 560 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 H3BNH8 94 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 CDC7O00311 574 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 DFNA5O60443 496 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 H6PDO95479 791 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 C1orf105O95561 183 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 ALDOBP05062 364 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 SFTPCP11686 197 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 GPR6P46095 362 aaPredicted RBP4.26□□□□□ -1.73
USP54-206ENST00000433394 CAV2P51636 162 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 WNT4P56705 351 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 RPS15P62841 145 aaKnown RBP4.26□□□□□ -1.73
USP54-206ENST00000433394 IRX3P78415 501 aaPredicted RBP4.26□□□□□ -1.73
USP54-206ENST00000433394 ACVR1Q04771 509 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 ECH1Q13011 328 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 LRRC10Q5BKY1 277 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 COA6Q5JTJ3 125 aaKnown RBP4.26□□□□□ -1.73
USP54-206ENST00000433394 CASC10Q5T4H9 136 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 C1orf94Q6P1W5 598 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 C6orf89Q6UWU4 347 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 VN1R2Q8NFZ6 395 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 OR10G9Q8NGN4 311 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 SDR42E1Q8WUS8 393 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 TSEN15Q8WW01 171 aaKnown RBP4.26□□□□□ -1.73
USP54-206ENST00000433394 ELMO1Q92556 727 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 RASL11BQ9BPW5 248 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 OR11A1Q9GZK7 315 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 ASB8Q9H765 288 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 INPP5EQ9NRR6 644 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 ABCC3O15438 1527 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 E9PCH4 1651 aa4.26□□□□□ -1.73
USP54-206ENST00000433394 ARHGAP23Q9P227 1491 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 CAMSAP1Q5T5Y3 1602 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 SMCO2A6NFE2 343 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 GJE1A6NN92 205 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 SLC31A2O15432 143 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 FAM189A1O60320 539 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 KLHL41O60662 606 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 OR2J3O76001 311 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 CEP152O94986 1710 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 PNMA6AP0CW24 399 aaPredicted RBP4.25□□□□□ -1.73
USP54-206ENST00000433394 NAA10P41227 235 aaPredicted RBP4.25□□□□□ -1.73
USP54-206ENST00000433394 ATP5OP48047 213 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 ZNF763Q0D2J5 394 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 ZNF544Q6NX49 715 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 SSX9Q7RTT3 188 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 MFSD6LQ8IWD5 586 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 PDIK1LQ8N165 341 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 CCDC148Q8NFR7 591 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 FGF14Q92915 247 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 MED8Q96G25 268 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 CFAP53Q96M91 514 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 TGS1Q96RS0 853 aaKnown RBP4.25□□□□□ -1.73
USP54-206ENST00000433394 ATP5SQ99766 215 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 C11orf70Q9BRQ4 267 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 IQCGQ9H095 443 aaKnown RBP4.25□□□□□ -1.73
USP54-206ENST00000433394 SRMSQ9H3Y6 488 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 PRR34Q9NV39 138 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 IL17CQ9P0M4 197 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 GCNT4Q9P109 453 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 UXTQ9UBK9 157 aaPredicted RBP4.25□□□□□ -1.73
USP54-206ENST00000433394 NEUROG3Q9Y4Z2 214 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 KIF25-AS1Q9Y6Z4 181 aa4.25□□□□□ -1.73
USP54-206ENST00000433394 KIF1BO60333 1816 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms