RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 C2orf16Q68DN1 1984 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 DVL1O14640 695 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 HCRTR2O43614 444 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 DVL1P1P54792 670 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CCL23P55773 120 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 OR1Q1Q15612 314 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 SLC36A2Q495M3 483 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM53Q6P2H8 277 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF836Q6ZNA1 936 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 IDO2Q6ZQW0 420 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PPP1R3BQ86XI6 285 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM178AQ8NBL3 297 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TP53I13Q8NBR0 393 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 FNDC9Q8TBE3 224 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TM4SF19Q96DZ7 209 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 SENP5Q96HI0 755 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MRPS18CQ9Y3D5 142 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 E5RGE8 158 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 H2AFB2P0C5Z0 115 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PBLDP30039 288 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MVDP53602 400 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 RPL27P61353 136 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 STEAP3Q658P3 488 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 Q6ZTK2 550 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 OR5AR1Q8NGP9 310 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MRPL24Q96A35 216 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PRR11Q96HE9 360 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PTCHD1Q96NR3 888 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 DUSP15Q9H1R2 295 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF304Q9HCX3 659 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 BIN3Q9NQY0 253 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ACOXLQ9NUZ1 547 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 C1orf123Q9NWV4 160 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 DNAJC27Q9NZQ0 273 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 USP36Q9P275 1121 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 EXTL2Q9UBQ6 330 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 GNG8Q9UK08 70 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 FBXO4Q9UKT5 387 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 POLDIP2Q9Y2S7 368 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 U3KQV3 271 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF462Q96JM2 2506 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TMED7-TICAM2A0A0A6YYA0 188 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CDS2O95674 445 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CEACAM5P06731 702 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 C8orf89P0DMQ9 161 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MSR1P21757 451 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 BDKRB2P30411 391 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 B4GALNT1Q00973 533 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TIAL1Q01085 375 aaKnown RBP eCLIP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 KCNMB1Q16558 191 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF551Q7Z340 670 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM25Q86YD3 366 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 FAM90A1Q86YD7 464 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF547Q8IVP9 402 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 SAXO1Q8IYX7 474 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 OTOSQ8NHW6 89 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 STOML3Q8TAV4 291 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 RNF133Q8WVZ7 376 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF707Q96C28 371 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MBOAT4Q96T53 435 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 KXD1Q9BQD3 176 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 LPAR3Q9UBY5 353 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PNMA8BQ9ULN7 279 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 HSF4Q9ULV5 492 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 USP22Q9UPT9 525 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 M0R129 80 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ST8SIA5O15466 376 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 OR7A10O76100 309 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CD3GP09693 182 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CEBPBP17676 345 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 C19orf57Q0VDD7 668 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TNK1Q13470 666 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 FBXO48Q5FWF7 155 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CACUL1Q86Y37 369 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 OR6K2Q8NGY2 324 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 NDRG1Q92597 394 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TGM7Q96PF1 710 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 LIN7BQ9HAP6 207 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 REV1Q9UBZ9 1251 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CLEC4EQ9ULY5 219 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 YARS2Q9Y2Z4 477 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 LSM2Q9Y333 95 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 A0A1B0GWA3 101 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PRAMEF27A3QJZ7 478 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PRAMEF25A6NGN4 478 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 C17orf105B2RV13 164 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 H7C2Y5 167 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PRAMEF4O60810 478 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 LCKP06239 509 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 C21orf33P30042 268 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PGDP52209 483 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 DGKZQ13574 1117 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 GPR68Q15743 365 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PRTGQ2VWP7 1150 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CLLU1Q5K131 121 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PRAMEF9Q5VWM5 478 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 RBM23Q86U06 439 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 D2HGDHQ8N465 521 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM59Q9BXS4 323 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 SLC38A1Q9H2H9 487 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms