RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 NUDCD3Q8IVD9 361 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CCDC50Q8IVM0 306 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 PRSS58Q8IYP2 241 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 MICU2Q8IYU8 434 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ZNF683Q8IZ20 524 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 FBXL13Q8NEE6 735 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 FAM83FQ8NEG4 500 aaPredicted RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 OR2L3Q8NG85 312 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 OR5T3Q8NGG3 340 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 NANPQ8TBE9 248 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 FAM110BQ8TC76 370 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 RAET1EQ8TD07 263 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 DYDC1Q8WWB3 177 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ELMO1Q92556 727 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 GTF2H4Q92759 462 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CPB2Q96IY4 423 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CEP19Q96LK0 163 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 C12orf42Q96LP6 360 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CYP2S1Q96SQ9 504 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CTRCQ99895 268 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CENPKQ9BS16 269 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 WRAP53Q9BUR4 548 aaKnown RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 PARD6BQ9BYG5 372 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 TM6SF2Q9BZW4 377 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 IL22Q9GZX6 179 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 SAV1Q9H4B6 383 aaPredicted RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 RHOJQ9H4E5 214 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ELOVL6Q9H5J4 265 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 NANOGQ9H9S0 305 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 IMP3Q9NV31 184 aaKnown RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 ADA2Q9NZK5 511 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ZNF639Q9UID6 485 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ZNF221Q9UK13 617 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 PITPNC1Q9UKF7 332 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 KLK12Q9UKR0 248 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 NEU3Q9UQ49 428 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 USP6P35125 1406 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ATP10DQ9P241 1426 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ROCK2O75116 1388 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 A0A1W2PPE3 182 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PRSS37A4D1T9 235 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 GOLGA6L10A6NI86 522 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CENPBD1B2RD01 187 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 C9JVG2 144 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 KLRC4-KLRK1H3BQV0 150 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SIVA1O15304 175 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 B4GALT5O43286 388 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 TIMM8AO60220 97 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 UBTFL1P0CB47 393 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 ZNF7P17097 686 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 PRPS1L1P21108 318 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 GABRR1P24046 479 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ACTR1BP42025 376 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CAV2P51636 162 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CCR8P51685 355 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 NUP107P57740 925 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 VSNL1P62760 191 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 RPL10AP62906 217 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 CDK16Q00536 496 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 REEP5Q00765 189 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ZNF33AQ06730 810 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 MICBQ29980 383 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CCDC153Q494R4 210 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 GGTA1PQ4G0N0 100 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 OR2A2Q6IF42 318 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 HSD17B13Q7Z5P4 300 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 DHDDSQ86SQ9 333 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PARGQ86W56 976 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SLC38A6Q8IZM9 456 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CENPSQ8N2Z9 138 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 LIX1Q8N485 282 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ALLCQ8N6M5 410 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 TMEM104Q8NE00 496 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 SDR9C7Q8NEX9 313 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PROKR2Q8NFJ6 384 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 OR5D18Q8NGL1 313 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 OR1L4Q8NGR5 311 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 ADAMTS16Q8TE57 1224 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CIDECQ96AQ7 238 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 DGCR14Q96DF8 476 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 MBOAT7Q96N66 472 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 DEFB118Q96PH6 123 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 VPS35Q96QK1 796 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 TMEM175Q9BSA9 504 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 NICN1Q9BSH3 213 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 C20orf24Q9BUV8 137 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 TOLLIPQ9H0E2 274 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 TRIM45Q9H8W5 580 aaPredicted RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 STARD5Q9NSY2 213 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PIPOXQ9P0Z9 390 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 MIOXQ9UGB7 285 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CYB5R1Q9UHQ9 305 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 MRM2Q9UI43 246 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 MEMO1Q9Y316 297 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 OR10H1Q9Y4A9 318 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 CSDC2Q9Y534 153 aaKnown RBP2.12□□□□□ -2.07
CLK1-204ENST00000432425 FKBP7Q9Y680 259 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 PBRM1Q86U86 1689 aa2.12□□□□□ -2.07
CLK1-204ENST00000432425 MYO10Q9HD67 2058 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms