RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 ATG5Q9H1Y0 275 aa10.36□□□□□ -0.75
CLDN4-202ENST00000431918 PPIL3Q9H2H8 161 aaKnown RBP10.36□□□□□ -0.75
CLDN4-202ENST00000431918 LIN7BQ9HAP6 207 aa10.36□□□□□ -0.75
CLDN4-202ENST00000431918 CHRNA9Q9UGM1 479 aa10.36□□□□□ -0.75
CLDN4-202ENST00000431918 PLPP2O43688 288 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ZNF780AO75290 641 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 DDOSTP39656 456 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 RFX2P48378 723 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 BDH1Q02338 343 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ALKBH1Q13686 389 aaKnown RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 OR2AJ1Q8NGZ0 328 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 SLC7A6Q92536 515 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 GINS4Q9BRT9 223 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 RDH8Q9NYR8 311 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 PTRH2Q9Y3E5 179 aaKnown RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 TRAV18A0A075B6X5 111 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 GPRIN2O60269 458 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ALOX12BO75342 701 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ZFPL1O95159 310 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 H2AFB2P0C5Z0 115 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ICAM2P13598 275 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 DCDP81605 110 aaKnown RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 GLO1Q04760 184 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ZNF782Q6ZMW2 699 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 SLC16A9Q7RTY1 509 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 NPEPL1Q8NDH3 523 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 OR6N1Q8NGY5 312 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ZNF775Q96BV0 537 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 MVB12AQ96EY5 273 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 LAT2Q9GZY6 243 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 MED29Q9NX70 200 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 EIF3KQ9UBQ5 218 aaKnown RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 SLC22A13Q9Y226 551 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 A0A1W2PR77 199 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 KRT33AO76009 404 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ARSBP15848 533 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 HSD11B1P28845 292 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 RBMS1P29558 406 aaKnown RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 SLC6A9P48067 706 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 CLRN1P58418 232 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 KLHL26Q53HC5 615 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 FAM199XQ6PEV8 388 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 CORO6Q6QEF8 472 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 MRGPREQ86SM8 312 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ZBTB44Q8NCP5 570 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 OR1N1Q8NGS0 311 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 PTGES2Q9H7Z7 377 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ZNF69Q9UC07 566 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 COA3Q9Y2R0 106 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 A8MVM7 634 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 GATBO75879 557 aaKnown RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 AKR7A3O95154 331 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 RNF4P78317 190 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 CCL7P80098 99 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 PUDPQ08623 228 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 SLC25A45Q8N413 288 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 TNFAIP8L1Q8WVP5 186 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 KIAA1143Q96AT1 154 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-202ENST00000431918 ABRACLQ9P1F3 81 aa10.35□□□□□ -0.75
CLDN4-202ENST00000431918 KIAA1549LQ6ZVL6 1849 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 UBE2QL1A1L167 161 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 PLA2G10O15496 165 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 GDNFP39905 211 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 P2RX1P51575 399 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 GAS1P54826 345 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 SPOCK1Q08629 439 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 DMWDQ09019 674 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 Q499Y3 187 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 SLC35D3Q5M8T2 416 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 EEF1A1P5Q5VTE0 462 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 RAET1LQ5VY80 246 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 COMMD7Q86VX2 200 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 LHFPL5Q8TAF8 219 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 DUSP23Q9BVJ7 150 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 PPA2Q9H2U2 334 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 AUNIPQ9H7T9 357 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 PLEKHA1Q9HB21 404 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 NPAP1Q9NZP6 1156 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 SHOXO15266 292 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 AKR7A2O43488 359 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 SIGLEC6O43699 453 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 EPXP11678 715 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 IFNGR1P15260 489 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 FAUP35544 74 aaKnown RBP10.34□□□□□ -0.75
CLDN4-202ENST00000431918 CAMK2DQ13557 499 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 ETFDHQ16134 617 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 SGCAQ16586 387 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 NDUFAF7Q7L592 441 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 TMED4Q7Z7H5 227 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 ATG4DQ86TL0 474 aaPredicted RBP10.34□□□□□ -0.75
CLDN4-202ENST00000431918 C9orf40Q8IXQ3 194 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 OR6V1Q8N148 313 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 SYS1Q8N2H4 156 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 ARIH2OSQ8N7S6 290 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 EDAQ92838 391 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 ABHD1Q96SE0 405 aa10.34□□□□□ -0.75
CLDN4-202ENST00000431918 USB1Q9BQ65 265 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms