RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CD274Q9NZQ7 290 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 IKZF2Q9UKS7 526 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMCO1Q9UM00 188 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 SBF1O95248 1867 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 A0A1W2PP64 1363 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 LTBP1Q14766 1721 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 FANCIQ9NVI1 1328 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 MKI67P46013 3256 aaKnown RBP2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 IGLV3-10A0A075B6K4 115 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 NSG1A0A0A6YYJ2 146 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 HEATR9A2RTY3 570 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 FAM231BA6NCW3 169 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 HDAC3O15379 428 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 CACNG3O60359 315 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 CIB2O75838 187 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 P04436 131 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 CCL5P13501 91 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 CMA1P23946 247 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 ANXA13P27216 316 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 HNRNPH3P31942 346 aaKnown RBP2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 TFPI2P48307 235 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 APOC4P55056 127 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 FBXW4P57775 412 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 GNB2P62879 340 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 KCNJ2P63252 427 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 CSNK1G2P78368 415 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 IL17AQ16552 155 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 XKR7Q5GH72 579 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 RSBN1Q5VWQ0 802 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 OTPQ5XKR4 325 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 TIGD3Q6B0B8 471 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 LRRC31Q6UY01 552 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMEM179BQ7Z7N9 219 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZNF546Q86UE3 836 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 SLC26A11Q86WA9 606 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZBED8Q8IZ13 594 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 BBS5Q8N3I7 341 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR7G2Q8NG99 324 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR52K2Q8NGK3 314 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 PLPPR1Q8TBJ4 325 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 PYROXD1Q8WU10 500 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 LRRC58Q96CX6 371 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 MS4A4EQ96PG1 132 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 SH3GL1Q99961 368 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMEM246Q9BRR3 403 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 YTHDF1Q9BYJ9 559 aaKnown RBP2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 ILKAPQ9H0C8 392 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 RNF167Q9H6Y7 350 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 RANBP3Q9H6Z4 567 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 PTGES2Q9H7Z7 377 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 VPS37BQ9H9H4 285 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 ISG20L2Q9H9L3 353 aaKnown RBP2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 MYOZ2Q9NPC6 264 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 INPP5EQ9NRR6 644 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 AIG1Q9NVV5 245 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 QPCTLQ9NXS2 382 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 KLHL28Q9NXS3 571 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 BTNL2Q9UIR0 455 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 NAP1L2Q9ULW6 460 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 TP53TG3Q9ULZ0 132 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 STARD10Q9Y365 291 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 SMAD5-AS1Q9Y6J3 95 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 CDH10Q9Y6N8 788 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 SCN2AQ99250 2005 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 UBR3Q6ZT12 1888 aa2.18□□□□□ -2.06
HMGB1P27-201ENST00000431429 TRIOBPQ9H2D6 2365 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 TUBGCP6Q96RT7 1819 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 KIR2DL5BA0A0G2JN68 375 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 KIR2DL5BA0A0G2JPC4 375 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 A0A0J9YXY3 114 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR2AG2A6NM03 316 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 TCP11X1B4DZS4 312 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 ERVV-1B6SEH8 477 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 SGK1O00141 431 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 NPIPB7O75200 414 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 LY6G6DO95868 133 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 AGTP01019 485 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 IGKV3-15P01624 115 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 KRT14P02533 472 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 KLK3P07288 261 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 UBTFL1P0CB47 393 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 CD1BP29016 333 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 PRDX3P30048 256 aaKnown RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 OTX1P32242 354 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 GSSP48637 474 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 RPS8P62241 208 aaKnown RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 TGFBR3Q03167 851 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 DAZ2Q13117 558 aaKnown RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 ATP6AP1Q15904 470 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 HSP90AB3PQ58FF7 597 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 PRAMEF20Q5VT98 475 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 TRIM40Q6P9F5 258 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 SASS6Q6UVJ0 657 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMIGD1Q6UXZ0 262 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 MFSD6LQ8IWD5 586 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 KIR2DL5AQ8N109 375 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 MS4A15Q8N5U1 240 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 SPATA4Q8NEY3 305 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 VN1R2Q8NFZ6 395 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms