RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CBX7O95931 251 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 TNFSF4P23510 183 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 RGS6P49758 472 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 NTRK2Q16620 822 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 SPINK14Q6IE38 97 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 SLC43A2Q8N370 569 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 COL25A1Q9BXS0 654 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 OR10A2Q9H208 303 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 PCDHB10Q9UN67 800 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 VWA8A3KMH1 1905 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF701M0R085 212 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 MRPL19P49406 292 aaKnown RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 PRKXP51817 358 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 DYNLRB1Q9NP97 96 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 KDM4EB2RXH2 506 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF814B7Z6K7 855 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 THBS2P35442 1172 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 HNRNPFP52597 415 aaKnown RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 EBPQ15125 230 aaKnown RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 WIPI1Q5MNZ9 446 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF813Q6ZN06 617 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 GCM1Q9NP62 436 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 NDUFAF4Q9P032 175 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 FOXJ2Q9P0K8 574 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 M0R082 166 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 SYT7O43581 403 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 SLC19A2O60779 497 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 ATP6V1G1O75348 118 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 LIFP15018 202 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 RAB11BQ15907 218 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF417Q8TAU3 575 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 PTPMT1Q8WUK0 201 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF587Q96SQ5 575 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-207ENST00000429896 HCAR1Q9BXC0 346 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 PRAMEF27A3QJZ7 478 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 INMT-MINDY4F8WBC2 141 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 H7C1C5 153 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 NXPH3O95157 252 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 DIRAS3O95661 229 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 S100PP25815 95 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 LCN6P62502 163 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 MEPCEQ7L2J0 689 aaKnown RBP11.75□□□□□ -0.53
PTCH1-207ENST00000429896 CSNK2A3Q8NEV1 391 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 TINAGL1Q9GZM7 467 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-207ENST00000429896 PRO3102Q9H379 93 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 SERTAD4Q9NUC0 356 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 ACER3Q9NUN7 267 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 DNAJB11Q9UBS4 358 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 CAPNS1P04632 268 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 HOXB9P17482 250 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-207ENST00000429896 S100A12P80511 92 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 CDC20Q12834 499 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 OR11A1Q9GZK7 315 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 GPATCH2Q9NW75 528 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 AGPAT2O15120 278 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 GYPBP06028 91 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 WNT3P56703 355 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 FCRLAQ7L513 359 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 OR5M9Q8NGP3 310 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 MICU1Q9BPX6 476 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF223Q9UK11 482 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-207ENST00000429896 NTNG1Q9Y2I2 539 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 ANKRD30BLA7E2S9 258 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 NKX2-8O15522 239 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 AMY2AP04746 511 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 CD59P13987 128 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 PITPNBP48739 271 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 MDGA2Q7Z553 956 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 OR14J1Q9UGF5 321 aa11.75□□□□□ -0.53
PTCH1-207ENST00000429896 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 PLSCR5A0PG75 271 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF254O75437 659 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 MZT1Q08AG7 82 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTCH1-207ENST00000429896 EIF5AL1Q6IS14 154 aaKnown RBP11.74□□□□□ -0.53
PTCH1-207ENST00000429896 C16orf47Q6ZP98 133 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-207ENST00000429896 NKAIN4Q8IVV8 208 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 RASL10BQ96S79 203 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 URM1Q9BTM9 101 aaKnown RBP11.74□□□□□ -0.53
PTCH1-207ENST00000429896 SLC38A1Q9H2H9 487 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 MED17Q9NVC6 651 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 MOKQ9UQ07 419 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 CLDN24A6NM45 220 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 ACOT8O14734 319 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 HTR5AP47898 357 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 MPEG1Q2M385 716 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 SYT14P1Q58G82 188 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 CENPSQ8N2Z9 138 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 HAVCR2Q8TDQ0 301 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 STK35Q8TDR2 534 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 CAMLGP49069 296 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 C21orf58P58505 322 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 BDH1Q02338 343 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF117Q03924 483 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 OR2A2Q6IF42 318 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 MAML2Q8IZL2 1156 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-207ENST00000429896 GIMAP5Q96F15 307 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 CEPT1Q9Y6K0 416 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 PTAFRP25105 342 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms