RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 GIMD1P0DJR0 217 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 RAC2P15153 192 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 HOXA11P31270 313 aaPredicted RBP6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 OR10G6Q8NH81 332 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 FAM122AQ96E09 287 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 ORAI3Q9BRQ5 295 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 GHITMQ9H3K2 345 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 TXNRD2Q9NNW7 524 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 SLAMF8Q9P0V8 285 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 VAX2Q9UIW0 290 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 RBM7Q9Y580 266 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 OR6C68A6NDL8 312 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF814B7Z6K7 855 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 HBQ1P09105 142 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 NME1P15531 152 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 EDNRAP25101 427 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 SFTPDP35247 375 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 HSD11B2P80365 405 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 ATP6V1FQ16864 119 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF705AQ6ZN79 300 aaPredicted RBP6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 ZNF627Q7L945 461 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 MITD1Q8WV92 249 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 TNFRSF14Q92956 283 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 MBOAT4Q96T53 435 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 ARHGAP9Q9BRR9 750 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 FZD3Q9NPG1 666 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 ANAPC1Q9H1A4 1944 aa6.96□□□□□ -1.29
SYNPO2-202ENST00000429713 A0A0B4J2A0 478 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 PLSCR5A0PG75 271 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 CRYBA1P05813 215 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ERVFRD-1P60508 538 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 MRM1Q6IN84 353 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 CMTM1Q8IZ96 169 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 OR51A2Q8NGJ7 313 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 GPER1Q99527 375 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 SHPKQ9UHJ6 478 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 CDC42EP3Q9UKI2 254 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 CCL16O15467 120 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 GLULP15104 373 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 VAMP3Q15836 100 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF789Q5FWF6 425 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 GDF6Q6KF10 455 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 OR9A4Q8NGU2 314 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 UPRTQ96BW1 309 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 SMIM19Q96E16 107 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 STACQ99469 402 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 JAM3Q9BX67 310 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ZDBF2Q9HCK1 2354 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 FREM1Q5H8C1 2179 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 PRNPP04156 253 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 PRDX3P30048 256 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 PPM1AP35813 382 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 GRK6P43250 576 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 CNKSR3Q6P9H4 555 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ADGRE4PQ86SQ3 457 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 PRSS58Q8IYP2 241 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 HAS2Q92819 552 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 PIGQQ9BRB3 760 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 SGPP1Q9BX95 441 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 HDAC8Q9BY41 377 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 COL4A1P02462 1669 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 TLX3O43711 291 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 DIRAS3O95661 229 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 RHOP08100 348 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 CSNK2A2P19784 350 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF84P51523 738 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 TSPAN31Q12999 210 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 IRF3Q14653 427 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 AGTRAPQ6RW13 159 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 TOMM20LQ6UXN7 152 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 NUS1Q96E22 293 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 LINC00052Q96N35 136 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 C1QTNF2Q9BXJ5 285 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ASCL3Q9NQ33 180 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 BLACEA4D250 179 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 MT-ND6P03923 174 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 CTSEP14091 401 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 LAG3P18627 525 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 EDNRBP24530 442 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 NDUFA6P56556 154 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 RING1Q06587 406 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 OR8G1Q15617 311 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 PLA1AQ53H76 456 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 TMPRSS12Q86WS5 348 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 GCNT2Q8N0V5 402 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 OR9Q2Q8NGE9 314 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 TSLPQ969D9 159 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF764Q96H86 408 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 OPN3Q9H1Y3 402 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 BOLA1Q9Y3E2 137 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 SURF4O15260 269 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 SLC10A3P09131 477 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 BTF3P20290 206 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 GRPRP30550 384 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 FKBP1BP68106 108 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 TMEM241Q24JQ0 296 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 ALG10BQ5I7T1 473 aa6.96□□□□□ -1.3
SYNPO2-202ENST00000429713 KCTD11Q693B1 232 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms