RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 A0A1W2PPL8 197 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR6C65A6NJZ3 312 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 SNTNA6NMZ2 147 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 HSPB2A8KAH6 182 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 FAM171A2A8MVW0 826 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CENPBD1B2RD01 187 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 EEF1E1-BLOC1S5C9J1V9 151 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF587BE7ETH6 402 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 EEF1E1O43324 174 aaKnown RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 DENRO43583 198 aaKnown RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 AHCYL1O43865 530 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 ENTPD6O75354 484 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 KHDRBS3O75525 346 aaKnown RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 UPK3AO75631 287 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 C1QL1O75973 258 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 TOXO94900 526 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CRHP06850 196 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 QDPRP09417 244 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CLUP10909 449 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CTLA4P16410 223 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 SPI1P17947 270 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 GNLYP22749 145 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 EDNRAP25101 427 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CTSSP25774 331 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CRABP1P29762 137 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 FMO3P31513 532 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 NTF4P34130 210 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 TIMP3P35625 211 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 UQCRFS1P47985 274 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC25A1P53007 311 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 NUDT6P53370 316 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CDH11P55287 796 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 ISL1P61371 349 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 DBPQ10586 325 aaPredicted RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 MED21Q13503 144 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 APOFQ13790 326 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 GUSBP1Q15486 140 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 HSPB2Q16082 182 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 SOWAHCQ53LP3 525 aaPredicted RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF362Q5T0B9 420 aaPredicted RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 RIPPLY2Q5TAB7 128 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 TSPO2Q5TGU0 170 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 LCN1P1Q5VSP4 162 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 NXNL2Q5VZ03 156 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 TMEM211Q6ICI0 200 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 VWA1Q6PCB0 445 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZSCAN2Q7Z7L9 614 aaPredicted RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 FJX1Q86VR8 437 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF786Q8N393 782 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 FAM26EQ8N5C1 309 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 POMGNT2Q8NAT1 580 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR51L1Q8NGJ5 315 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 RHOXF1Q8NHV9 184 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 PRR7Q8TB68 274 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 FNDC8Q8TC99 324 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 APH1BQ8WW43 257 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 RND1Q92730 232 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 RFKQ969G6 155 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 TMEM54Q969K7 222 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 Q96MT0 163 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF582Q96NG8 517 aaPredicted RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 TSSK2Q96PF2 358 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 HCAR1Q9BXC0 346 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 MRPL13Q9BYD1 178 aaKnown RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 NUAK2Q9H093 628 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CRLF2Q9HC73 371 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 GLTPQ9NZD2 209 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 H2AFY2Q9P0M6 372 aaPredicted RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 PRSS50Q9UI38 385 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 PROCRQ9UNN8 238 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 LRRC42Q9Y546 428 aa7□□□□□ -1.29
HMGA1P4-201ENST00000428643 PRRC2CQ9Y520 2896 aaKnown RBP7□□□□□ -1.29
HMGA1P4-201ENST00000428643 CFAP46Q8IYW2 2715 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 ASH1LQ9NR48 2969 aaKnown RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF407Q9C0G0 2248 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 A0A0G2JNJ9 132 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC22A31A6NKX4 558 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 DVL2O14641 736 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 PRODHO43272 600 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 FAM20BO75063 409 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 WBP4O75554 376 aaKnown RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 TNFSF13O75888 250 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 HLA-DQA2P01906 255 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 STSP08842 583 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 GABRB1P18505 474 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 BMP5P22003 454 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 CEACAM8P31997 349 aaPredicted RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 OPRM1P35372 400 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 ATP6V1E1P36543 226 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR3A2P47893 321 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF84P51523 738 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 ROR2Q01974 943 aaKnown RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 GLO1Q04760 184 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF91Q05481 1191 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 FAPQ12884 760 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 CDK5R2Q13319 367 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 OCLNQ16625 522 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 SMN1Q16637 294 aaKnown RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 PHYHD1Q5SRE7 291 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms