RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 LAMB4A4D0S4 1761 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 UBR2Q8IWV8 1755 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 OVOS2A0A0G2JMS6 1433 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 MYH7P12883 1935 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 MAP3K19Q56UN5 1328 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 LAMA4Q16363 1823 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 MSH6P52701 1360 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 CEMIPQ8WUJ3 1361 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 STRCP1A6NGW2 1772 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 ARFGEF2Q9Y6D5 1785 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 A0A0G2JLM5 398 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 C12orf71A8MTZ7 269 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 C12orf77C9JDV5 145 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 HAS3O00219 553 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 RTL8CO15255 209 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 CA11O75493 328 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 SURF6O75683 361 aaKnown RBP1.63□□□□□ -2.15
PTPRC-208ENST00000427110 MOSP00540 346 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 SERPINA3P01011 423 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 MMP1P03956 469 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 ALDOBP05062 364 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 PSG2P11465 335 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 RCC1P18754 421 aaPredicted RBP1.63□□□□□ -2.15
PTPRC-208ENST00000427110 TBPP20226 339 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 CD1CP29017 333 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 RORAP35398 523 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 GYG1P46976 350 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 MPPED2Q15777 294 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 CYB5R2Q6BCY4 276 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 KDM7AQ6ZMT4 941 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 ACP7Q6ZNF0 438 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 LRRC74BQ6ZQY2 392 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 FAM43BQ6ZT52 329 aaPredicted RBP1.63□□□□□ -2.15
PTPRC-208ENST00000427110 PRSS41Q7RTY9 318 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 H2BFWTQ7Z2G1 175 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 UBE2J2Q8N2K1 259 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 ARIH2OSQ8N7S6 290 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 TPRX1Q8N7U7 411 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 OR51G1Q8NGK1 321 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 ACER1Q8TDN7 264 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 SHC3Q92529 594 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 TM4SF19Q96DZ7 209 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 PLEKHA8Q96JA3 519 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 FCRL1Q96LA6 429 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 HSFY1Q96LI6 401 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 OR2M2Q96R28 347 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 SDHCQ99643 169 aaPredicted RBP1.63□□□□□ -2.15
PTPRC-208ENST00000427110 TMEM246Q9BRR3 403 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 HDHD3Q9BSH5 251 aaPredicted RBP1.63□□□□□ -2.15
PTPRC-208ENST00000427110 ROPN1BQ9BZX4 212 aaPredicted RBP1.63□□□□□ -2.15
PTPRC-208ENST00000427110 SRMSQ9H3Y6 488 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 CLMPQ9H6B4 373 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 RANBP3Q9H6Z4 567 aaPredicted RBP1.63□□□□□ -2.15
PTPRC-208ENST00000427110 FN3KRPQ9HA64 309 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 CHMP5Q9NZZ3 219 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 DEC1Q9P2X7 70 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 NPTNQ9Y639 398 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 MYH3P11055 1940 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 C5P01031 1676 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 NUP188Q5SRE5 1749 aa1.63□□□□□ -2.15
PTPRC-208ENST00000427110 MAP3K5Q99683 1374 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 SPEF2Q9C093 1822 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 SYNJ2BP-COX16A0A087WUM0 186 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 TRBV6-6A0A0A6YYG2 114 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 A0A0G2JN53 185 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 KIR2DL5BA0A0G2JN68 375 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 KIR2DL5BA0A0G2JPC4 375 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 FAM240BA0A1B0GVZ2 78 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 OR52A4PA6NMU1 304 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 FAM166BA8MTA8 275 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CXCL11O14625 94 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 PPP1R2P9O14990 202 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 PSTPIP1O43586 416 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 FCMRO60667 390 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 HMMRO75330 724 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ERLIN2O94905 339 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 SLC25A27O95847 323 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 PNMA6AP0CW24 399 aaPredicted RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 MX1P20591 662 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 MDKP21741 143 aaPredicted RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 BTCP35070 178 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ATP5C1P36542 298 aaKnown RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 HSD17B2P37059 387 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 RPS10P46783 165 aaKnown RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 TPMTP51580 245 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 UCNP55089 124 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CDH4P55283 916 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ERVK-25P63136 954 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 SMARCB1Q12824 385 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 KIAA0087Q14695 138 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 GNMTQ14749 295 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 DGUOKQ16854 277 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 RFX4Q33E94 735 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CEP55Q53EZ4 464 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 LRRC10Q5BKY1 277 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CASC10Q5T4H9 136 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CTRB2Q6GPI1 263 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 LCN12Q6JVE5 192 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 C19orf35Q6ZS72 473 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 RUFY3Q7L099 469 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms