RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 MALT1Q9UDY8 824 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 MGAT4BQ9UQ53 548 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 GPR52Q9Y2T5 361 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 MAGED1Q9Y5V3 778 aaPredicted RBP6.52□□□□□ -1.37
LINC01049-201ENST00000426840 PKDREJQ9NTG1 2253 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 A0A1W2PRG6 482 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ARRDC5A6NEK1 342 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 OR6C65A6NJZ3 312 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF726A6NNF4 738 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 RPL36A-HNRNPH2H7BZ11 118 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 AKAP8O43823 692 aaKnown RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ENTPD5O75356 428 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 TRMUO75648 421 aaKnown RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 NDUFB2O95178 105 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 IGHMP01871 453 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 CD14P08571 375 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ITGA5P08648 1049 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 PGA4P0DJD7 388 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 PGA3P0DJD8 388 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ACADSP16219 412 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 FASP25445 335 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 CCKARP32238 428 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 RPL27P61353 136 aaKnown RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ERVK-25P63136 954 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 TAF11Q15544 211 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 GABRA6Q16445 453 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 RFX4Q33E94 735 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 CARD17Q5XLA6 110 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 SMARCD3Q6STE5 483 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 CD300LDQ6UXZ3 194 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 MEX3BQ6ZN04 569 aaKnown RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 DPY19L2P2Q6ZN68 376 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 RASSF6Q6ZTQ3 369 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 FAM122BQ7Z309 247 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 C10orf67Q8IYJ2 551 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 UBE2J2Q8N2K1 259 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ARIH2OSQ8N7S6 290 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 AQP11Q8NBQ7 271 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 OR10G2Q8NGC3 310 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 OR5K1Q8NHB7 308 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 LINC01560Q8TB33 94 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF519Q8TB69 540 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 HDAC2Q92769 488 aaKnown RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 NMD3Q96D46 503 aaKnown RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 NRBF2Q96F24 287 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 SLC25A44Q96H78 314 aaPredicted RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 BOD1Q96IK1 185 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 Q96M85 177 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 WFIKKN1Q96NZ8 548 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 GPX7Q96SL4 187 aaPredicted RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 PKP2Q99959 881 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 NIPSNAP1Q9BPW8 284 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 OR10A4Q9H209 315 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 OR52D1Q9H346 318 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 GPR35Q9HC97 309 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 S100A14Q9HCY8 104 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 ASB6Q9NWX5 421 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 IL20Q9NYY1 176 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 PDP1Q9P0J1 537 aaPredicted RBP6.51□□□□□ -1.37
LINC01049-201ENST00000426840 UPB1Q9UBR1 384 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 REV1Q9UBZ9 1251 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 BAHCC1Q9P281 2608 aa6.51□□□□□ -1.37
LINC01049-201ENST00000426840 TUBAL3A6NHL2 446 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 CENPBD1B2RD01 187 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 M0R3G1 203 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ARPC3O15145 178 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 E2F6O75461 281 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 LYZL6O75951 148 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 TXNDC12O95881 172 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 THBDP07204 575 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 IGFBP1P08833 259 aaPredicted RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 FCGR1AP12314 374 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 APEHP13798 732 aaKnown RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ANXA8P13928 327 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 MPGP29372 298 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 RPL4P36578 427 aaKnown RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ACVR1BP36896 505 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 PEX19P40855 299 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 KIR2DL3P43628 341 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 DAP3P51398 398 aaKnown RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF133P52736 654 aaPredicted RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ARF1P84077 181 aaKnown RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ROR2Q01974 943 aaKnown RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 COX10Q12887 443 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF362Q5T0B9 420 aaPredicted RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 C9orf135Q5VTT2 229 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ZFP1Q6P2D0 407 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 FAHD1Q6P587 224 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 SHQ1Q6PI26 577 aaKnown RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 KLHL17Q6TDP4 642 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF620Q6ZNG0 422 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 BHLHA15Q7RTS1 189 aaPredicted RBP6.5□□□□□ -1.37
LINC01049-201ENST00000426840 WFDC3Q8IUB2 231 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 GPR137CQ8N3F9 429 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 CLDN22Q8N7P3 220 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 WDR31Q8NA23 367 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 STEAP2Q8NFT2 490 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 OR8D4Q8NGM9 314 aa6.5□□□□□ -1.37
LINC01049-201ENST00000426840 OR6N1Q8NGY5 312 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms