RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 YIPF5Q969M3 257 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC25A44Q96H78 314 aaPredicted RBP10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TXNDC15Q96J42 360 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TMEM43Q9BTV4 400 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF747Q9BV97 191 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CCNB1IP1Q9NPC3 277 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 STX18Q9P2W9 335 aaKnown RBP10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SEC14L4Q9UDX3 406 aa10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 YLPM1P49750 1951 aaKnown RBP10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.5□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NUP214P35658 2090 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF503-AS2A6NEH8 195 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PLPP3O14495 311 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 DHHO43323 396 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 FZD7O75084 574 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 C1QCP02747 245 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 IGFBP1P08833 259 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 UMPSP11172 480 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 HLA-DOBP13765 273 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF250P15622 560 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CCNOP22674 350 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MAGEB1P43366 347 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF81P51508 661 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MVDP53602 400 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CLRN1P58418 232 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NRN1LQ496H8 165 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 AWAT1Q58HT5 328 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PHYHD1Q5SRE7 291 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 AVPI1Q5T686 147 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 USP51Q70EK9 711 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC35D2Q76EJ3 337 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZER1Q7Z7L7 766 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CARM1Q86X55 608 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ARMC8Q8IUR7 673 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ALDH16A1Q8IZ83 802 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ANKRD42Q8N9B4 389 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC26A7Q8TE54 656 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CCL17Q92583 94 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 DIRC2Q96SL1 478 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF696Q9H7X3 374 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NANSQ9NR45 359 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SDR39U1Q9NRG7 319 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NKIRAS1Q9NYS0 192 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PLCE1Q9P212 2302 aa10.49□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MALRD1Q5VYJ5 2156 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 POM121CA8CG34 1229 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MCIDASD6RGH6 385 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PRSS23O95084 383 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SNAP29O95721 258 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 IGHG1P01857 330 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 BGLAPP02818 100 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 BMP2P12643 396 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ATP4BP51164 291 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 VSNL1P62760 191 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZP4Q12836 540 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TSTQ16762 297 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ARMCX4Q5H9R4 360 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF613Q6PF04 617 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 OR1J1Q8NGS3 322 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NFKBIDQ8NI38 313 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 POP5Q969H6 163 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MAL2Q969L2 176 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MCHR1Q99705 422 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MRI1Q9BV20 369 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 G6PC2Q9NQR9 355 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 UBAP1Q9NZ09 502 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CGGBP1Q9UFW8 167 aaPredicted RBP10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZDHHC8Q9ULC8 765 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ANGPT4Q9Y264 503 aa10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ANK3Q12955 4377 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB3-203ENST00000425319 IGLV3-9A0A075B6K5 115 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 A0A1W2PRG6 482 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 GMNCA6NCL1 334 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 FMO6PO60774 539 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 RP2O75695 350 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 QDPRP09417 244 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 PATE4P0C8F1 98 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 HKR1P10072 659 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ADRA2CP18825 462 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TNFSF4P23510 183 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ARHGDIAP52565 204 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SCARB2Q14108 478 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 KLHL36Q8N4N3 616 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 AENQ8WTP8 325 aaKnown RBP10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 GTF2H4Q92759 462 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TMEM54Q969K7 222 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC25A28Q96A46 364 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 VPS33AQ96AX1 596 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 ZNF75AQ96N20 296 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC6A7Q99884 636 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SH3GL3Q99963 347 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TMPRSS13Q9BYE2 586 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 OR51B6Q9H340 312 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 SLC6A13Q9NSD5 602 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 TMEM38BQ9NVV0 291 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 MYEF2Q9P2K5 600 aaKnown RBP10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 CHST2Q9Y4C5 530 aa10.47□□□□□ -0.73
HLA-DQB3-203ENST00000425319 WIPI2Q9Y4P8 454 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms