RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 STEAP1BQ6NZ63 245 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SSX9Q7RTT3 188 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 C17orf64Q86WR6 236 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 DND1Q8IYX4 353 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3Q8IZP1 549 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF383Q8NA42 475 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TEX19Q8NA77 164 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SECTM1Q8WVN6 248 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 GLYATL1Q969I3 302 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TGM7Q96PF1 710 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SGPP1Q9BX95 441 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 AICDAQ9GZX7 198 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC23A2Q9UGH3 650 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 KLF15Q9UIH9 416 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 ASCC3Q8N3C0 2202 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 H7C417 338 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 NRG2O14511 850 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 NDUFS4O43181 175 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ERI3O43414 337 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 FBXO24O75426 580 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 PAPLNO95428 1278 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 GPANK1O95872 356 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 IGHV2-5P01817 119 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 SKP1P63208 163 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ARHGAP40Q5TG30 622 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 MFSD12Q6NUT3 480 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 FAM129CQ86XR2 697 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 OR6N1Q8NGY5 312 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ADAMTS15Q8TE58 950 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 DCUN1D4Q92564 292 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ARL11Q969Q4 196 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 PPP1R14AQ96A00 147 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 CYYR1Q96J86 154 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 LYSMD1Q96S90 227 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 NRIP2Q9BQI9 281 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 SUCNR1Q9BXA5 334 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 MTFP1Q9UDX5 166 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 M0R036 132 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 POP4O95707 220 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 RHOP08100 348 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 FAUP35544 74 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 CXADRP78310 365 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 PON3Q15166 354 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ANKRD39Q53RE8 183 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 LIPNQ5VXI9 398 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ASTLQ6HA08 431 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC35F2Q8IXU6 374 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 EID2Q8N6I1 236 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 CPNE4Q96A23 557 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 MIB2Q96AX9 1013 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 RRNAD1Q96FB5 475 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 DEFB118Q96PH6 123 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ARHGDIGQ99819 225 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 EDEM2Q9BV94 578 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF350Q9GZX5 532 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ATG5Q9H1Y0 275 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 SEMA6CQ9H3T2 930 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 SIGLEC7Q9Y286 467 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 IER3IP1Q9Y5U9 82 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 URADA6NGE7 173 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 GGT3PA6NGU5 568 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 MSGN1A6NI15 193 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF208O43345 1280 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 AGAP20933 346 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 CERS1P27544 350 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 RBM34P42696 430 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 EPHB3P54753 998 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 SPCS3P61009 180 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 PYY3Q5JQD4 70 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 ACOT7LQ6ZUV0 252 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 PLPP7Q8NBV4 271 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 MOAP1Q96BY2 351 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 CMTM3Q96MX0 182 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 OPA3Q9H6K4 179 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 UNKLQ9H9P5 680 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 RCC2Q9P258 522 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 CDV3Q9UKY7 258 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC35A3Q9Y2D2 325 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 WDR45Q9Y484 360 aa10.28□□□□□ -0.76
SEC61A1-202ENST00000424880 MDC1Q14676 2089 aaKnown RBP10.27□□□□□ -0.76
SEC61A1-202ENST00000424880 H7C1Q1 480 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC31A2O15432 143 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 RAB3DO95716 219 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 CD2P06729 351 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 CTSAP10619 480 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 TAS2R60P59551 318 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 OR1Q1Q15612 314 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 CCDC54Q8NEL0 328 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC25A43Q8WUT9 341 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 SLAMF9Q96A28 289 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 S100PBPQ96BU1 408 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 JSRP1Q96MG2 331 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 SFXN1Q9H9B4 322 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 BCL2L10Q9HD36 194 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 CSAG2Q9Y5P2 127 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM72A0PK05 275 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms