RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ATP6V0D2Q8N8Y2 350 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 NRACQ8N912 160 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CCDC54Q8NEL0 328 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 OR4F17Q8NGA8 305 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 OR52H1Q8NGJ2 320 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 OR4F5Q8NH21 305 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 C16orf52Q8NHV5 167 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 FAM45AQ8TCE6 357 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CXorf40AQ8TE69 158 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 APH1BQ8WW43 257 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 IL1F10Q8WWZ1 152 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 DNASE2BQ8WZ79 361 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 OR8D1Q8WZ84 308 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GTF3AQ92664 365 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 NEIL2Q969S2 332 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 WDR34Q96EX3 536 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 NSL1Q96IY1 281 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 SERPINB12Q96P63 405 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 NEDD4LQ96PU5 975 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 OR4F4Q96R69 305 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CSF3RQ99062 836 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 RNF2Q99496 336 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 BARHL1Q9BZE3 327 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 NAA50Q9GZZ1 169 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 METTL9Q9H1A3 318 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 MFSD1Q9H3U5 465 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 MAP6D1Q9H9H5 199 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 RETNQ9HD89 108 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 FGF20Q9NP95 211 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ASCL3Q9NQ33 180 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 C12orf4Q9NQ89 552 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 SDR39U1Q9NRG7 319 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 DDX19AQ9NUU7 478 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 NLE1Q9NVX2 485 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CLN6Q9NWW5 311 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 IL36RNQ9UBH0 155 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 OPN4Q9UHM6 478 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 LSM7Q9UK45 103 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 AGO1Q9UL18 857 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GUCA1BQ9UMX6 200 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 RCL1Q9Y2P8 373 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ARL2BPQ9Y2Y0 163 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 EIF3AQ14152 1382 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 A0A087WZ39 114 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TRBV5-3A0A0A0MS03 114 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TRBV7-9A0A0J9YWB2 115 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 LOC101059948A0A1B0GTJ6 334 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TCRBV9S1A1TA0A576 114 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 SLC5A10A0PJK1 596 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ASPDHA6ND91 283 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 PRR23AA6NEV1 266 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 RNF212BA8MTL3 300 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ZNF487B1APH4 448 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 IDSB3KWA1 339 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TRDCB7Z8K6 153 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 C9J4A7 227 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 FTCDNL1E5RQL4 147 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TGOLN2O43493 480 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 SSNA1O43805 119 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TOM1O60784 492 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 RAMP1O60894 148 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 WDR1O75083 606 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 GLSO94925 669 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ANGPTL1O95841 491 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 JCHAINP01591 159 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 HBE1P02100 147 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TCRBP04435 133 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 SERPINA5P05154 406 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 CALB1P05937 261 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 CDK1P06493 297 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 MYOGP15173 224 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 COX5AP20674 150 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 CA6P23280 308 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 EDNRAP25101 427 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 OR1E1P30953 314 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 HOXD3P31249 432 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 FGF9P31371 208 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 OMPP47874 163 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 RASSF2P50749 326 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 DCDC1P59894 354 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ZP1P60852 638 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 LSM6P62312 80 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TLE4Q04727 773 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 AESQ08117 197 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 DLG1Q12959 904 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 RIGQ13278 110 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 OR5I1Q13606 314 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 LAGE3Q14657 143 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 PTGES3Q15185 160 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 RAB35Q15286 201 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 RBMS2Q15434 407 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 HLFQ16534 295 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 CHRFAM7AQ494W8 412 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 ACTL10Q5JWF8 245 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 FNBP1LQ5T0N5 605 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 TYW3Q6IPR3 259 aaKnown RBP3.16□□□□□ -1.9
SF3B1-205ENST00000424674 NIPAL1Q6NVV3 410 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 SLC25A47Q6Q0C1 308 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 LRRN1Q6UXK5 716 aa3.16□□□□□ -1.9
SF3B1-205ENST00000424674 Q6ZSR9 355 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms