RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 B4GALT1P15291 398 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 NOS3P29474 1203 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 SLC6A6P31641 620 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 GSSP48637 474 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 CCNIQ14094 377 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 GK3PQ14409 553 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 RFX4Q33E94 735 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 ARIH2OSQ8N7S6 290 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 MAGEE2Q8TD90 523 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-202ENST00000421712 UTP4Q969X6 686 aaKnown RBP13.79□□□□□ -0.2
BRAT1-202ENST00000421712 RASD2Q96D21 266 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 SAMD8Q96LT4 415 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 ERMAPQ96PL5 475 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-202ENST00000421712 RAB3IPQ96QF0 476 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-202ENST00000421712 HS3ST6Q96QI5 342 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 ALG12Q9BV10 488 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 OR52D1Q9H346 318 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 OBP2BQ9NPH6 170 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 PDP1Q9P0J1 537 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-202ENST00000421712 MGAT4BQ9UQ53 548 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 AP4S1Q9Y587 144 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 UNC79Q9P2D8 2635 aa13.79□□□□□ -0.2
BRAT1-202ENST00000421712 CENPEQ02224 2701 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 DPRXA6NFQ7 191 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 H7C1C5 153 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 SOCS2O14508 198 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 DEAF1O75398 565 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-202ENST00000421712 FARS2O95363 451 aaKnown RBP13.78□□□□□ -0.2
BRAT1-202ENST00000421712 SLC2A10O95528 541 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 SDHAP31040 664 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 GUCA1AP43080 201 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-202ENST00000421712 LCN6P62502 163 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 BSPH1Q075Z2 132 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 HIST3H3Q16695 136 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 THEM4Q5T1C6 240 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 NCMAPQ5T1S8 102 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 GPR139Q6DWJ6 353 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 ZNF770Q6IQ21 691 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-202ENST00000421712 TMEM108Q6UXF1 575 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 CCDC36Q8IYA8 594 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-202ENST00000421712 CLDN22Q8N7P3 220 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 OR52L1Q8NGH7 329 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 ZNF519Q8TB69 540 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 FNDC8Q8TC99 324 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 KCNK17Q96T54 332 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 FEVQ99581 238 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 RERGLQ9H628 205 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 EGLN3Q9H6Z9 239 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 UBTD1Q9HAC8 227 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 ZNF556Q9HAH1 456 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 NRIP3Q9NQ35 241 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 NPAP1Q9NZP6 1156 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 EDARQ9UNE0 448 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
BRAT1-202ENST00000421712 ARPC4-TTLL3A0A0A6YYG9 625 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 ENTPD5O75356 428 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 PLAUP00749 431 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 OR8G3PP0DMU2 310 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 GSTM3P21266 225 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 PAX7P23759 505 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 PTAFRP25105 342 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 FXYD6P3P58550 94 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 FMODQ06828 376 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 PIGFQ07326 219 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 KRR1Q13601 381 aaKnown RBP13.77□□□□□ -0.21
BRAT1-202ENST00000421712 KPNB1Q14974 876 aaKnown RBP13.77□□□□□ -0.21
BRAT1-202ENST00000421712 CLEC12AQ5QGZ9 265 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 C1QTNF12Q5T7M4 302 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 RPL13AP3Q6NVV1 102 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 DCHS2Q6V1P9 2916 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 ZNF704Q6ZNC4 412 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-202ENST00000421712 ZNF620Q6ZNG0 422 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 FAM122BQ7Z309 247 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 TMEM179BQ7Z7N9 219 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 JAZF1Q86VZ6 243 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 DEPDC4Q8N2C3 294 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 NANOS1Q8WY41 292 aaKnown RBP13.77□□□□□ -0.21
BRAT1-202ENST00000421712 NRGNQ92686 78 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 BOD1Q96IK1 185 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 GPX7Q96SL4 187 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-202ENST00000421712 KCNS3Q9BQ31 491 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 NELFAQ9H3P2 528 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 SEC61A2Q9H9S3 476 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 TMEM38BQ9NVV0 291 aa13.77□□□□□ -0.21
BRAT1-202ENST00000421712 HEATR1Q9H583 2144 aaKnown RBP13.76□□□□□ -0.21
BRAT1-202ENST00000421712 ABCD4O14678 606 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 HLA-HP01893 362 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 PRKACGP22612 351 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 FASP25445 335 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 CD40P25942 277 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 LOXP28300 417 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-202ENST00000421712 CDAP32320 146 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 NPRL3Q12980 569 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 SGCAQ16586 387 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 MESTQ5EB52 335 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 ADAM5Q6NVV9 412 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 SLC22A25Q6T423 547 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 SEZ6L2Q6UXD5 910 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms