RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CDC14CA4D256 554 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 SELENOFO60613 162 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 GAAP10253 952 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 CLUP10909 449 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 CD1EP15812 388 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 CPT2P23786 658 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 BIDP55957 195 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 STEAP1BQ6NZ63 245 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 DOK3Q7L591 496 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 GDPD3Q7L5L3 318 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 MARCH3Q86UD3 253 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 LINC01555Q8NAE3 123 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 PCOLCE2Q9UKZ9 415 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 TBXA2RP21731 343 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 DPP4P27487 766 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 GDF1P27539 372 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 SNRPD2P62316 118 aaKnown RBP13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 FABP5Q01469 135 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 THEM4Q5T1C6 240 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 LIPNQ5VXI9 398 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 TMPRSS9Q7Z410 1059 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 SULF2Q8IWU5 870 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 DNAJA3Q96EY1 480 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 OR2A5Q96R48 311 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 C20orf85Q9H1P6 137 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 EXOSC3Q9NQT5 275 aaKnown RBP13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 SIRT3Q9NTG7 399 aaPredicted RBP13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 WSB2Q9NYS7 404 aaPredicted RBP13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 GPR55Q9Y2T6 319 aaPredicted RBP13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 ZNF175Q9Y473 711 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 SIP14410 1827 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 LPLP06858 475 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 GABRG2P18507 467 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 EPHA2P29317 976 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 PXNP49023 591 aaPredicted RBP13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 FOXK1P85037 733 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 HTR4Q13639 388 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 OLIG3Q7RTU3 272 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 TRAPPC6BQ86SZ2 158 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 ZNF679Q8IYX0 411 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 ZNF511Q8NB15 262 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 UBE2ZQ9H832 354 aaPredicted RBP13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 ZNF286AQ9HBT8 521 aa13.55□□□□□ -0.24
AP000550.1-201ENST00000420508 ELK1P19419 428 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 CLDN20P56880 219 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 OR1D5P58170 312 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 EEF1A1P68104 462 aaKnown RBP13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 DCUN1D4Q92564 292 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 IP6K3Q96PC2 410 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 DNTTIP1Q9H147 329 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 ATXN7L1Q9ULK2 861 aaPredicted RBP13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 TGM6O95932 706 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 GIPP09681 153 aaPredicted RBP13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 FNTBP49356 437 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 HYAL1Q12794 435 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 RAB3CQ96E17 227 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 ULBP3Q9BZM4 244 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 MRPS28Q9Y2Q9 187 aaKnown RBP13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 OR6C65A6NJZ3 312 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 RFXAPO00287 272 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 TPPPO94811 219 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 IFNGR1P15260 489 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 TAS2R20P59543 309 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 ARSKQ6UWY0 536 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 SLC16A12Q6ZSM3 486 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 MKXQ8IYA7 352 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 UCK1Q9HA47 277 aa13.54□□□□□ -0.24
AP000550.1-201ENST00000420508 TEX51A0A1B0GUA7 166 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 TNFSF14O43557 240 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 HLA-AP01891 365 aaKnown RBP13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 IGFBP1P08833 259 aaPredicted RBP13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 RRADP55042 308 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 INTS12Q96CB8 462 aaKnown RBP13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 M0R036 132 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 CD46P15529 392 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 ENPP1P22413 925 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 EVI2BP34910 448 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 FAM109AQ8N4B1 249 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 BEST4Q8NFU0 473 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 RRNAD1Q96FB5 475 aaKnown RBP13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 SLC17A5Q9NRA2 495 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 NFYAP23511 347 aaPredicted RBP13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 CLDN17P56750 224 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 ACSM1Q08AH1 577 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 MFAP5Q13361 173 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 ZNF141Q15928 474 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 SLC36A2Q495M3 483 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 ALKBH2Q6NS38 261 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 IDO2Q6ZQW0 420 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 SHISA6Q6ZSJ9 500 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 AAED1Q7RTV5 226 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 OR1J2Q8NGS2 313 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 OR4K15Q8NH41 348 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 NICN1Q9BSH3 213 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 RAC2P15153 192 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 HEPHL1Q6MZM0 1159 aa13.53□□□□□ -0.24
AP000550.1-201ENST00000420508 FAM57BQ71RH2 274 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms