RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 NTN4Q9HB63 628 aa12.07□□□□□ -0.48
NFE4-201ENST00000420058 SSU72Q9NP77 194 aaKnown RBP12.07□□□□□ -0.48
NFE4-201ENST00000420058 MMP26Q9NRE1 261 aa12.07□□□□□ -0.48
NFE4-201ENST00000420058 SDR39U1Q9NRG7 319 aaPredicted RBP12.07□□□□□ -0.48
NFE4-201ENST00000420058 DDX28Q9NUL7 540 aaKnown RBP12.07□□□□□ -0.48
NFE4-201ENST00000420058 TMEM38BQ9NVV0 291 aa12.07□□□□□ -0.48
NFE4-201ENST00000420058 SLCO1C1Q9NYB5 712 aa12.07□□□□□ -0.48
NFE4-201ENST00000420058 TAS2R5Q9NYW4 299 aa12.07□□□□□ -0.48
NFE4-201ENST00000420058 SLC25A37Q9NYZ2 338 aa12.07□□□□□ -0.48
NFE4-201ENST00000420058 CLIC1O00299 241 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 HDAC3O15379 428 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 UBOX5O94941 541 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 MFN2O95140 757 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 ANP32DO95626 131 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 SNAP29O95721 258 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 IGHV3-13P01766 116 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 OR8G3PP0DMU2 310 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 AHCYP23526 432 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 GATA3P23771 443 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 PRTN3P24158 256 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 FPR2P25090 351 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 RAD52P43351 418 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 CDH12P55289 794 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 LCN2P80188 198 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 TSTQ16762 297 aaKnown RBP12.06□□□□□ -0.48
NFE4-201ENST00000420058 TNFAIP8L3Q5GJ75 292 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 MSANTD1Q6ZTZ1 278 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 DOK3Q7L591 496 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 MAVSQ7Z434 540 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 SNX32Q86XE0 403 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 KIRREL3Q8IZU9 778 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
NFE4-201ENST00000420058 OR6X1Q8NH79 312 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 C11orf40Q8WZ69 217 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 ASPNQ9BXN1 380 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 ZIM2Q9NZV7 527 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 SLAMF8Q9P0V8 285 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 ZNF69Q9UC07 566 aa12.06□□□□□ -0.48
NFE4-201ENST00000420058 LEF1Q9UJU2 399 aaPredicted RBP12.06□□□□□ -0.48
NFE4-201ENST00000420058 PPIAL4EA0A075B759 164 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 PPIAL4CA0A0B4J2A2 164 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 SLC22A23A1A5C7 686 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 CLDN25C9JDP6 229 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 PPIAL4DF5H284 164 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 TM9SF1O15321 606 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 DHHO43323 396 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 SNNO75324 88 aaPredicted RBP12.05□□□□□ -0.48
NFE4-201ENST00000420058 SERPINI2O75830 405 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 LYPD3O95274 346 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 IGHV1-46P01743 117 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 THY1P04216 161 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 LCKP06239 509 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 MMP7P09237 267 aaPredicted RBP12.05□□□□□ -0.48
NFE4-201ENST00000420058 PPIAL4FP0DN26 164 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 IDO1P14902 403 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 LSP1P33241 339 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 MMP15P51511 669 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 SELENOVP59797 346 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 TEKQ02763 1124 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 RBBP4Q09028 425 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 SLC2A7Q6PXP3 512 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 SLC35D2Q76EJ3 337 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 OR5J2Q8NH18 312 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 NFKBIDQ8NI38 313 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 EPYCQ99645 322 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 TMEM43Q9BTV4 400 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 UNKLQ9H9P5 680 aaKnown RBP12.05□□□□□ -0.48
NFE4-201ENST00000420058 DCAF16Q9NXF7 216 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 GPR160Q9UJ42 338 aa12.05□□□□□ -0.48
NFE4-201ENST00000420058 TMEM247A6NEH6 219 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 DNAJC9-AS1A6NH13 148 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 C11orf98E9PRG8 122 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 TRAPPC2LH3BP13 241 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 ADORA3P0DMS8 318 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 POLR2JP52435 117 aaKnown RBP12.04□□□□□ -0.48
NFE4-201ENST00000420058 WDR4P57081 412 aaKnown RBP12.04□□□□□ -0.48
NFE4-201ENST00000420058 GLO1Q04760 184 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 FADDQ13158 208 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 HIST3H3Q16695 136 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 HFEQ30201 348 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 C6orf10Q5SRN2 563 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 ZNF771Q7L3S4 317 aaPredicted RBP12.04□□□□□ -0.48
NFE4-201ENST00000420058 LRRC17Q8N6Y2 441 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 OR4K5Q8NGD3 323 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 CCL17Q92583 94 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 RAB1CQ92928 201 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 OR52B2Q96RD2 323 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 BCL2L14Q9BZR8 327 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 RMND5AQ9H871 391 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 CACYBPQ9HB71 228 aaKnown RBP12.04□□□□□ -0.48
NFE4-201ENST00000420058 TMEM27Q9HBJ8 222 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 CDH20Q9HBT6 801 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 KLHL21Q9UJP4 597 aa12.04□□□□□ -0.48
NFE4-201ENST00000420058 SOX21Q9Y651 276 aaPredicted RBP12.04□□□□□ -0.48
NFE4-201ENST00000420058 QDPRP09417 244 aa12.03□□□□□ -0.48
NFE4-201ENST00000420058 PGA4P0DJD7 388 aa12.03□□□□□ -0.48
NFE4-201ENST00000420058 PGA3P0DJD8 388 aa12.03□□□□□ -0.48
NFE4-201ENST00000420058 KITP10721 976 aa12.03□□□□□ -0.48
NFE4-201ENST00000420058 MPV17P39210 176 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms