RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 MLLT11Q13015 90 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-205ENST00000418258 FAM26DQ5JW98 314 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 DPY19L2P2Q6ZN68 376 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 IDO2Q6ZQW0 420 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 CYP4V2Q6ZWL3 525 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-205ENST00000418258 CBLL1Q75N03 491 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 ETFBKMTQ8IXQ9 262 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 EXD3Q8N9H8 876 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 TCTEX1D2Q8WW35 142 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 PIGTQ969N2 578 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 SEMA4GQ9NTN9 838 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 CNOT2Q9NZN8 540 aaKnown RBP10.34□□□□□ -0.75
PTCH1-205ENST00000418258 PROCRQ9UNN8 238 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 CORINQ9Y5Q5 1042 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 SLC5A10A0PJK1 596 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 UBAC2Q8NBM4 344 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 GLCEO94923 617 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 SRFP11831 508 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 CLDN12P56749 244 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF836Q6ZNA1 936 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 SLC22A24Q8N4F4 322 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 GGHQ92820 318 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 CPNE4Q96A23 557 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-205ENST00000418258 TECTBQ96PL2 329 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 PPA2Q9H2U2 334 aa10.34□□□□□ -0.75
PTCH1-205ENST00000418258 CD1CP29017 333 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 HOXD11P31277 338 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 B3GNT8Q7Z7M8 397 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 CATSPERDQ86XM0 798 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 FAM185AQ8N0U4 392 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TMEM255BQ8WV15 326 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 MS4A8Q9BY19 250 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TMEM82A0PJX8 343 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 FIGNL2A6NMB9 653 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 SULT1C2O00338 296 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 HLA-DOBP13765 273 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 LIM2P55344 173 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 MC2RQ01718 297 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 DUSP6Q16828 381 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ADPRMQ3LIE5 342 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 YOD1Q5VVQ6 348 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 GFRALQ6UXV0 394 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 H1FNTQ75WM6 255 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 GCNT2Q8N0V5 402 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 FAM109AQ8N4B1 249 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 KCNG3Q8TAE7 436 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 FBXW5Q969U6 566 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 QPCTLQ9NXS2 382 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 IL37Q9NZH6 218 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 KLF13Q9Y2Y9 288 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 IGHV3-64DA0A0J9YX35 117 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF133P52736 654 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 DBPQ10586 325 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 PHLDA2Q53GA4 152 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ATOH8Q96SQ7 321 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 EDEM2Q9BV94 578 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 PMS2P1A4D2B8 440 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 SUB1P53999 127 aaKnown RBP eCLIP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ELAVL1Q15717 326 aaKnown RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 METRNLQ641Q3 311 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF767PQ75MW2 155 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 H2BFWTQ7Z2G1 175 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ARFGAP1Q8N6T3 406 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TMEM106AQ96A25 262 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TM4SF18Q96CE8 201 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 RNF170Q96K19 258 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 LRFN5Q96NI6 719 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 MENTQ9BUN1 341 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ANKRD60Q9BZ19 345 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 CD300AQ9UGN4 299 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 SCN1AP35498 2009 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF705GA8MUZ8 300 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TRAF3IP2O43734 574 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 EIF2DP41214 584 aaKnown RBP10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TLE4Q04727 773 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TMEM240Q5SV17 173 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 DESI1Q6ICB0 168 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 SYT9Q86SS6 491 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 NOXA1Q86UR1 476 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 KDM8Q8N371 416 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 RASD2Q96D21 266 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 ERVMER34-1Q9H9K5 563 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 NECAP2Q9NVZ3 263 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 C5orf49A4QMS7 147 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TNFSF11O14788 317 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 GGTA1PQ4G0N0 100 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 OR2G6Q5TZ20 316 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 RTL8AQ9BWD3 113 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 TBC1D29Q9UFV1 150 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 OR51B4Q9Y5P0 310 aa10.33□□□□□ -0.76
PTCH1-205ENST00000418258 SGCEO43556 437 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 TGM1P22735 817 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 C21orf33P30042 268 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 RBMS2Q15434 407 aaKnown RBP10.32□□□□□ -0.76
PTCH1-205ENST00000418258 VWA2Q5GFL6 755 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 HIST2H3PS2Q5TEC6 136 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 FRMPD2BQ6IN97 320 aa10.32□□□□□ -0.76
PTCH1-205ENST00000418258 ZBED3Q96IU2 234 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms