RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 FGFBP3Q8TAT2 258 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 FAM216AQ8WUB2 273 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 ZFAND2BQ8WV99 257 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.19□□□□□ -1.42
CASP4-202ENST00000417440 VPS33AQ96AX1 596 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 ZMYND19Q96E35 227 aaPredicted RBP6.19□□□□□ -1.42
CASP4-202ENST00000417440 ITCHQ96J02 903 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 TSPAN32Q96QS1 320 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 FOXB1Q99853 325 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 SLC6A7Q99884 636 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 SH3GL3Q99963 347 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 RBM4Q9BWF3 364 aaKnown RBP6.19□□□□□ -1.42
CASP4-202ENST00000417440 ZNF416Q9BWM5 594 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 RMND5AQ9H871 391 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 RNF121Q9H920 327 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 SELENONQ9NZV5 590 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 KLHL14Q9P2G3 628 aa6.19□□□□□ -1.42
CASP4-202ENST00000417440 HEATR1Q9H583 2144 aaKnown RBP6.19□□□□□ -1.42
CASP4-202ENST00000417440 PLCE1Q9P212 2302 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 IGKV1D-42A0A075B6H8 117 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 A0A087WUJ7 227 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 TRAV20A0A0B4J274 112 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 CLIC1O00299 241 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 PLPP2O43688 288 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 BCL10O95999 233 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 LCKP06239 509 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 ANPEPP15144 967 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 HTR2AP28223 471 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 CSNK1A1P48729 337 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 COMPP49747 757 aaPredicted RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 BIDP55957 195 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 SELENOVP59797 346 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 HILS1P60008 231 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 ERVS71-1P61550 626 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 NCALDP61601 193 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 RPS23P62266 143 aaKnown RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 BST1Q10588 318 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 RGNQ15493 299 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 TSTQ16762 297 aaKnown RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 AWAT1Q58HT5 328 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 CEP85LQ5SZL2 805 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 HHATQ5VTY9 493 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 RGS7BPQ6MZT1 257 aaPredicted RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 TMEM154Q6P9G4 183 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 NET1Q7Z628 596 aaPredicted RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 COMTD1Q86VU5 262 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 SKA3Q8IX90 412 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 KIRREL3Q8IZU9 778 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 GLB1L3Q8NCI6 653 aaPredicted RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 OR9I1Q8NGQ6 314 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 BBS10Q8TAM1 723 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 GTF3AQ92664 365 aaKnown RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 ZNF75AQ96N20 296 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 MOGAT1Q96PD6 335 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 DUX5Q96PT3 197 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 JMJD8Q96S16 334 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 RACGAP1Q9H0H5 632 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 ZNF665Q9H7R5 613 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 CDH20Q9HBT6 801 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 SLC52A3Q9NQ40 469 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 HINT3Q9NQE9 182 aaKnown RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 DECR2Q9NUI1 292 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 SLC7A8Q9UHI5 535 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 ZNF346Q9UL40 294 aaKnown RBP6.18□□□□□ -1.42
CASP4-202ENST00000417440 PPIAL4AQ9Y536 164 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 PCDHGB1Q9Y5G3 927 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 ARFGEF3Q5TH69 2177 aa6.18□□□□□ -1.42
CASP4-202ENST00000417440 IGHV1-69-2A0A0G2JMI3 117 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 ISPDA4D126 451 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 TRPC5OSA6NMA1 111 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 C17orf100A8MU93 164 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 TM9SF1O15321 606 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 HDAC3O15379 428 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SPRY3O43610 288 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 ZNF500O60304 480 aaPredicted RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 TPST1O60507 370 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 RP2O75695 350 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 UBL3O95164 117 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 OR6A2O95222 327 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 BGLAPP02818 100 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SERPINA5P05154 406 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 ZCCHC18P0CG32 403 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 ADORA3P0DMS8 318 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 IDO1P14902 403 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 CCNOP22674 350 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 AQP1P29972 269 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 POLR2JP52435 117 aaKnown RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 KLF3P57682 345 aaPredicted RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 LCN2P80188 198 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 PUDPQ08623 228 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 RBBP4Q09028 425 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 MELKQ14680 651 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 OR1Q1Q15612 314 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 PDCD4Q53EL6 469 aaKnown RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 GCNT6Q5T4J0 391 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 DCAF12L2Q5VW00 463 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 ULK3Q6PHR2 472 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 C5orf46Q6UWT4 87 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 C6orf89Q6UWU4 347 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SNX32Q86XE0 403 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms