RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 A0A1W2PR80 420 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 AHCYL1O43865 530 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF26P17031 533 aaPredicted RBP20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 CD47Q08722 323 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 CCNIQ14094 377 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 THEM4Q5T1C6 240 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF813Q6ZN06 617 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF627Q7L945 461 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 OR10G2Q8NGC3 310 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF519Q8TB69 540 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 HDAC2Q92769 488 aaKnown RBP20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 DUS3LQ96G46 650 aaKnown RBP20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 LURAP1Q96LR2 239 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 ZNF570Q96NI8 536 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 KCNK17Q96T54 332 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 DGCR6LQ9BY27 220 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 OR52D1Q9H346 318 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 SMURF2Q9HAU4 748 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 ARMC1Q9NVT9 282 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 ADAM18Q9Y3Q7 739 aa20.22■□□□□ 0.83
SMARCB1-205ENST00000417137 ARRDC5A6NEK1 342 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 SIAH2O43255 324 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 ARHGEF9O43307 516 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 CD3EP07766 207 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 APEHP13798 732 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 SDHAP31040 664 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 NCMAPQ5T1S8 102 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 TMEM108Q6UXF1 575 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 THSD4Q6ZMP0 1018 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 Q96M85 177 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 IL20RAQ9UHF4 553 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 IER3IP1Q9Y5U9 82 aa20.21■□□□□ 0.83
SMARCB1-205ENST00000417137 CELSR2Q9HCU4 2923 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 CACNA1DQ01668 2161 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 IMPA2O14732 288 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 MGRN1O60291 552 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 TIPRLO75663 272 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 FCGR1AP12314 374 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 PTAFRP25105 342 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 ZNF83P51522 516 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 ZNF133P52736 654 aaPredicted RBP20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 FXYD6P3P58550 94 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 KRTAP10-9P60411 292 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 MYBPC1Q00872 1141 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 COX10Q12887 443 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 ZNF620Q6ZNG0 422 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 RASSF6Q6ZTQ3 369 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 FAM122BQ7Z309 247 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 OR52L1Q8NGH7 329 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 NANOS1Q8WY41 292 aaKnown RBP20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 GTPBP3Q969Y2 492 aaKnown RBP20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 IFT27Q9BW83 186 aa20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 PDP1Q9P0J1 537 aaPredicted RBP20.2■□□□□ 0.82
SMARCB1-205ENST00000417137 IDH3BO43837 385 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 FARS2O95363 451 aaKnown RBP20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 FASP25445 335 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 GUCA1AP43080 201 aaPredicted RBP20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 CAPZA2P47755 286 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 IST1P53990 364 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 ACTR3P61158 418 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 NRN1LQ496H8 165 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 C10orf128Q5T292 105 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 SEZ6L2Q6UXD5 910 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 NRBF2Q96F24 287 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 RADILQ96JH8 1075 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 SAMD8Q96LT4 415 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 ERMAPQ96PL5 475 aaPredicted RBP20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 FEVQ99581 238 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 BDH2Q9BUT1 245 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 C1QTNF6Q9BXI9 259 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 NELFAQ9H3P2 528 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 ZNF556Q9HAH1 456 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 CDH10Q9Y6N8 788 aa20.19■□□□□ 0.82
SMARCB1-205ENST00000417137 TEX13CA0A0J9YWL9 993 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 DPRXA6NFQ7 191 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 M0R1B8 84 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 ARPC3O15145 178 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 SEC14L2O76054 403 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 TXNDC12O95881 172 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 OR8G3PP0DMU2 310 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 B4GALT1P15291 398 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 LOXP28300 417 aaPredicted RBP20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 NOS3P29474 1203 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 BSPH1Q075Z2 132 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 KRR1Q13601 381 aaKnown RBP20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 CD300LDQ6UXZ3 194 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 ADCK1Q86TW2 530 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 CLDN22Q8N7P3 220 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 FAM169BQ8N8A8 192 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 TMEM38BQ9NVV0 291 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 IL20Q9NYY1 176 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 NPAP1Q9NZP6 1156 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 RNF115Q9Y4L5 304 aa20.18■□□□□ 0.82
SMARCB1-205ENST00000417137 ALPK2Q86TB3 2170 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 PRSS37A4D1T9 235 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 PPP1R3DO95685 299 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 ANXA8P13928 327 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 NPR2P20594 1047 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 GABPB1Q06547 395 aaPredicted RBP20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 ATP6AP1Q15904 470 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms